FFCP PHASE1:Hg19::chr18:49762639..49762676,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:49762639..49762676,- | |||
|coexpression_cluster_id=C405 | |coexpression_cluster_id=C405 | ||
|description=CAGE_peak_at_chr18:49762639..49762676,- | |description=CAGE_peak_at_chr18:49762639..49762676,- | ||
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|ontology_enrichment_celltype=CL:0002621!1.12e-26!3;CL:0002327!6.33e-21!4;CL:0002159!7.55e-17!13;CL:0002166!2.00e-12!3;CL:0000362!1.10e-10!8;CL:0002557!9.82e-10!1;CL:1001319!1.17e-09!1;CL:1000600!1.17e-09!1;CL:0000066!2.77e-09!254;CL:0000312!3.48e-08!5;CL:0000622!7.25e-08!5;CL:0000240!5.92e-07!6;CL:0000311!5.92e-07!6;CL:0000079!5.92e-07!6;CL:0000237!5.92e-07!6;CL:0000036!5.92e-07!6;CL:0000357!5.92e-07!6;CL:0000114!5.92e-07!6;CL:0002076!7.52e-07!43;CL:0002251!8.68e-07!21 | |ontology_enrichment_celltype=CL:0002621!1.12e-26!3;CL:0002327!6.33e-21!4;CL:0002159!7.55e-17!13;CL:0002166!2.00e-12!3;CL:0000362!1.10e-10!8;CL:0002557!9.82e-10!1;CL:1001319!1.17e-09!1;CL:1000600!1.17e-09!1;CL:0000066!2.77e-09!254;CL:0000312!3.48e-08!5;CL:0000622!7.25e-08!5;CL:0000240!5.92e-07!6;CL:0000311!5.92e-07!6;CL:0000079!5.92e-07!6;CL:0000237!5.92e-07!6;CL:0000036!5.92e-07!6;CL:0000357!5.92e-07!6;CL:0000114!5.92e-07!6;CL:0002076!7.52e-07!43;CL:0002251!8.68e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002327;4.36e-50;4!CL:0000362;1.13e-22;9!CL:0000312;9.47e-19;5!CL:0000240;8.39e-16;6!CL:0000311;8.39e-16;6!CL:0000079;8.39e-16;6!CL:0000237;8.39e-16;6!CL:0002159;7.51e-15;14!CL:0000317;3.42e-12;2!CL:1000448;3.42e-12;2!CL:0002308;3.42e-12;2!CL:0002140;3.42e-12;2!CL:0002621;1.46e-08;3 | |ontology_enrichment_celltype_v019=CL:0002327;4.36e-50;4!CL:0000362;1.13e-22;9!CL:0000312;9.47e-19;5!CL:0000240;8.39e-16;6!CL:0000311;8.39e-16;6!CL:0000079;8.39e-16;6!CL:0000237;8.39e-16;6!CL:0002159;7.51e-15;14!CL:0000317;3.42e-12;2!CL:1000448;3.42e-12;2!CL:0002308;3.42e-12;2!CL:0002140;3.42e-12;2!CL:0002621;1.46e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002327,3.69e-50,4;CL:0000362,1.17e-22,9;CL:0000312,9.47e-19,5;CL:0000240,8.39e-16,6;CL:0000311,8.39e-16,6;CL:0000079,8.39e-16,6;CL:0000237,8.39e-16,6;CL:0000036,8.39e-16,6;CL:0000357,8.39e-16,6;CL:0000114,8.39e-16,6;CL:0002159,7.69e-15,14;CL:0000317,3.62e-12,2;CL:1000448,3.62e-12,2;CL:0002308,3.62e-12,2;CL:0002140,3.62e-12,2;CL:0002621,1.40e-08,3;CL:0000066,8.89e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000357;8.39e-16;6!CL:0000114;8.39e-16;6 | |ontology_enrichment_development_v019=CL:0000357;8.39e-16;6!CL:0000114;8.39e-16;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!1.12e-26!3;UBERON:0001911!6.33e-21!4;UBERON:0005333!6.33e-21!4;UBERON:0008425!6.33e-21!4;UBERON:0005311!6.33e-21!4;UBERON:0000076!9.61e-11!8;UBERON:0004807!1.25e-10!28;UBERON:0001828!2.23e-10!8;UBERON:0004645!1.17e-09!1;UBERON:0001256!1.17e-09!1;UBERON:0001259!1.17e-09!1;UBERON:0001708!1.52e-09!4;UBERON:0001704!1.52e-09!4;UBERON:0003102!3.00e-09!95;UBERON:0000161!2.06e-08!35;UBERON:0005153!3.94e-08!37;UBERON:0005157!1.15e-07!51;UBERON:0002365!5.12e-07!31;UBERON:0002330!5.12e-07!31;UBERON:0000166!8.68e-07!21 | |ontology_enrichment_uberon=UBERON:0001949!1.12e-26!3;UBERON:0001911!6.33e-21!4;UBERON:0005333!6.33e-21!4;UBERON:0008425!6.33e-21!4;UBERON:0005311!6.33e-21!4;UBERON:0000076!9.61e-11!8;UBERON:0004807!1.25e-10!28;UBERON:0001828!2.23e-10!8;UBERON:0004645!1.17e-09!1;UBERON:0001256!1.17e-09!1;UBERON:0001259!1.17e-09!1;UBERON:0001708!1.52e-09!4;UBERON:0001704!1.52e-09!4;UBERON:0003102!3.00e-09!95;UBERON:0000161!2.06e-08!35;UBERON:0005153!3.94e-08!37;UBERON:0005157!1.15e-07!51;UBERON:0002365!5.12e-07!31;UBERON:0002330!5.12e-07!31;UBERON:0000166!8.68e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;4.36e-50;4!UBERON:0001003;6.58e-14;15!UBERON:0007376;6.58e-14;15!UBERON:0002419;3.42e-12;2!UBERON:0007771;3.42e-12;2!UBERON:0003297;3.42e-12;2!UBERON:0001821;3.42e-12;2!UBERON:0003487;3.42e-12;2!UBERON:0001820;3.42e-12;2!UBERON:0002365;3.55e-11;31!UBERON:0002330;3.55e-11;31!UBERON:0010371;3.75e-11;31!UBERON:0001949;1.46e-08;3!UBERON:0003100;7.03e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0001911;4.36e-50;4!UBERON:0001003;6.58e-14;15!UBERON:0007376;6.58e-14;15!UBERON:0002419;3.42e-12;2!UBERON:0007771;3.42e-12;2!UBERON:0003297;3.42e-12;2!UBERON:0001821;3.42e-12;2!UBERON:0003487;3.42e-12;2!UBERON:0001820;3.42e-12;2!UBERON:0002365;3.55e-11;31!UBERON:0002330;3.55e-11;31!UBERON:0010371;3.75e-11;31!UBERON:0001949;1.46e-08;3!UBERON:0003100;7.03e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,3.69e-50,4;UBERON:0005333,3.69e-50,4;UBERON:0008425,3.69e-50,4;UBERON:0005311,3.69e-50,4;UBERON:0000076,1.56e-25,8;UBERON:0001003,6.73e-14,15;UBERON:0007376,6.73e-14,15;UBERON:0007383,6.73e-14,15;UBERON:0002419,3.62e-12,2;UBERON:0007771,3.62e-12,2;UBERON:0003297,3.62e-12,2;UBERON:0001821,3.62e-12,2;UBERON:0003487,3.62e-12,2;UBERON:0001820,3.62e-12,2;UBERON:0005089,3.62e-12,2;UBERON:0005088,3.62e-12,2;UBERON:0002365,8.72e-12,31;UBERON:0005085,8.72e-12,31;UBERON:0002330,8.72e-12,31;UBERON:0010371,3.62e-10,104;UBERON:0003100,4.76e-09,41;UBERON:0001949,1.40e-08,3 | |||
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|short_description=p@chr18:49762639..49762676,- | |short_description=p@chr18:49762639..49762676,- | ||
}} | }} |
Latest revision as of 01:17, 26 July 2015
Short description: | p@chr18:49762639..49762676, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:49762639..49762676, - |
Coexpression cluster: | C405_Keratinocyte_Mammary_Sebocyte_tongue_Corneal_Mallassezderived_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 3.69e-50 | 4 |
epidermal cell | 1.17e-22 | 9 |
keratinocyte | 9.47e-19 | 5 |
stratified squamous epithelial cell | 8.39e-16 | 6 |
keratin accumulating cell | 8.39e-16 | 6 |
stratified epithelial cell | 8.39e-16 | 6 |
keratinizing barrier epithelial cell | 8.39e-16 | 6 |
epithelial fate stem cell | 8.39e-16 | 6 |
stratified epithelial stem cell | 8.39e-16 | 6 |
surface ectodermal cell | 8.39e-16 | 6 |
general ecto-epithelial cell | 7.69e-15 | 14 |
sebum secreting cell | 3.62e-12 | 2 |
epithelial cell of sweat gland | 3.62e-12 | 2 |
epithelial cell of skin gland | 3.62e-12 | 2 |
acinar cell of sebaceous gland | 3.62e-12 | 2 |
gingival epithelial cell | 1.40e-08 | 3 |
epithelial cell | 8.89e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 3.69e-50 | 4 |
mammary bud | 3.69e-50 | 4 |
mammary ridge | 3.69e-50 | 4 |
mammary placode | 3.69e-50 | 4 |
external ectoderm | 1.56e-25 | 8 |
skin epidermis | 6.73e-14 | 15 |
outer epithelium | 6.73e-14 | 15 |
enveloping layer of ectoderm | 6.73e-14 | 15 |
skin gland | 3.62e-12 | 2 |
epidermis gland | 3.62e-12 | 2 |
gland of integumental system | 3.62e-12 | 2 |
sebaceous gland | 3.62e-12 | 2 |
skin sebaceous gland | 3.62e-12 | 2 |
sweat gland | 3.62e-12 | 2 |
sweat gland placode | 3.62e-12 | 2 |
sebaceous gland placode | 3.62e-12 | 2 |
exocrine gland | 8.72e-12 | 31 |
ectodermal placode | 8.72e-12 | 31 |
exocrine system | 8.72e-12 | 31 |
ecto-epithelium | 3.62e-10 | 104 |
female organism | 4.76e-09 | 41 |
gingival epithelium | 1.40e-08 | 3 |