FFCP PHASE1:Hg19::chr19:11275585..11275600,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:11275585..11275600,- | |||
|coexpression_cluster_id=C3747 | |||
|description=CAGE_peak_at_chr19:11275585..11275600,- | |description=CAGE_peak_at_chr19:11275585..11275600,- | ||
|id=chr19:11275585..11275600,- | |id=chr19:11275585..11275600,- | ||
|ontology_enrichment_celltype=CL:0000055!5.64e-07!180 | |ontology_enrichment_celltype=CL:0000055!5.64e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002540;5.25e-16;6!CL:0000214;1.56e-14;3!CL:0000135;2.19e-14;3!CL:0000388;2.19e-14;3!CL:0002092;7.99e-10;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,6.12e-16,6;CL:0000214,1.62e-14,3;CL:0000135,1.98e-14,3;CL:0000388,1.98e-14,3;CL:0002092,8.74e-10,10 | |||
|ontology_enrichment_development_v019=UBERON:0005754;4.22e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.71e-09!115 | |ontology_enrichment_uberon=UBERON:0007023!1.71e-09!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.56e-14;3!UBERON:0007616;1.56e-14;3!UBERON:0002217;1.56e-14;3!UBERON:0002018;1.56e-14;3!UBERON:0007846;2.19e-14;3!UBERON:0000043;2.19e-14;3!UBERON:0007845;2.19e-14;3!UBERON:0006947;3.50e-14;3!UBERON:0004054;3.50e-14;3!UBERON:0001000;1.97e-11;1!UBERON:0005352;1.97e-11;1!UBERON:0000998;4.22e-11;1!UBERON:0006868;4.22e-11;1!UBERON:0005904;7.16e-11;4!UBERON:0004457;1.30e-10;9!UBERON:0000042;1.30e-10;9!UBERON:0002371;2.87e-08;12!UBERON:0004175;1.03e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.62e-14,3;UBERON:0007616,1.62e-14,3;UBERON:0002217,1.62e-14,3;UBERON:0002018,1.62e-14,3;UBERON:0007846,1.98e-14,3;UBERON:0000043,1.98e-14,3;UBERON:0007845,1.98e-14,3;UBERON:0006947,2.77e-14,3;UBERON:0004054,2.77e-14,3;UBERON:0001000,1.45e-11,1;UBERON:0005352,1.45e-11,1;UBERON:0000998,4.01e-11,1;UBERON:0006868,4.01e-11,1;UBERON:0005904,6.02e-11,4;UBERON:0004457,4.81e-08,12;UBERON:0000042,4.81e-08,12 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0.783556884599516,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0,0,0.434539556882471,0.795285947051099,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51577443545116,0.573673241497627,0.354668382198357,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0.0920498986422993,0.646584227275248,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0.300946099727719,2.27407504055985,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0.131124414959424,0,0,0,1.46139224653261,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0,0,0,0,0,0,0,0.94443704049192,0.6970372701606,0.308033580176089,0.532306030317022,0,0.55597265731176,0,0.372158369359667,0,0,0,0.42793898803392,0.95460974377781,0,0.179872457583315,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0,0.141405431953713,0,0,0,0,2.31510213706675,0,0.202910376962704,0,0.281695602532241,0,0,0,0.709522128141196,2.32218398827431,4.28083360847872,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0.307160702099232,0,0,0.222617410045812,0,0.211125408127993,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,1.15425387755696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,2.76209081994573,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0.458320848023367,0,0.199679000498991,0.858452096273142,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0.25426853765475,1.08599920350743,0,0.653174720218818,0,0,0,0,0,0,0.129282956361551,0,0,0,0.427149650270779,0.157204305099666,0,0,0,0,0,0,0,0,0.327872630709804,0,0.886068179966986,0,0,0,0,0.372578417648301,0,0,0,0,0,0,0,0.597019211547496,0.467426619694449,0,2.27283606330107,8.30174075783498,20.4656580967203,0,2.41969478021182,0.15543720058278,0.295710299979268,0.159296767163702,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0.256916900385838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.470958557103084,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0.245148321753905,0,0.588925401344836,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,9.24351257262837,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0.0636471582781649,0.404234377916439,0,0,0,0.215166616178029,0,0,0.106727345877715,0,0.0898252021065869,0,0.244482888365733,0,0,0.201273793591026,0 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| ||
|short_description=p@chr19:11275585..11275600,- | |short_description=p@chr19:11275585..11275600,- | ||
}} | }} |
Latest revision as of 03:23, 26 July 2015
Short description: | p@chr19:11275585..11275600, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:11275585..11275600, - |
Coexpression cluster: | C3747_mesenchymal_tenocyte_Synoviocyte_myxofibrosarcoma_Hep2_cervix_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 6.12e-16 | 6 |
synovial cell | 1.62e-14 | 3 |
fibrocyte | 1.98e-14 | 3 |
tendon cell | 1.98e-14 | 3 |
bone marrow cell | 8.74e-10 | 10 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.62e-14 | 3 |
layer of synovial tissue | 1.62e-14 | 3 |
synovial joint | 1.62e-14 | 3 |
synovial membrane of synovial joint | 1.62e-14 | 3 |
dense regular connective tissue | 1.98e-14 | 3 |
tendon | 1.98e-14 | 3 |
regular connective tissue | 1.98e-14 | 3 |
male genital duct | 2.77e-14 | 3 |
internal male genitalia | 2.77e-14 | 3 |
vas deferens | 1.45e-11 | 1 |
spermatic cord | 1.45e-11 | 1 |
seminal vesicle | 4.01e-11 | 1 |
seminal fluid secreting gland | 4.01e-11 | 1 |
duct of male reproductive system | 6.02e-11 | 4 |
cavity lining | 4.81e-08 | 12 |
serous membrane | 4.81e-08 | 12 |