FFCP PHASE1:Hg19::chr19:12903367..12903458,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:12903367..12903458,- to FFCP PHASE1:Hg19::chr19:12903367..12903458,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=169bp_to_CU678639,CU679368_5end | |||
|cluster_id=chr19:12903367..12903458,- | |||
|coexpression_cluster_id=C1809 | |||
|description=CAGE_peak_2_at_CU678639_5end,CAGE_peak_2_at_CU679368_5end | |||
|id=chr19:12903367..12903458,- | |||
|ontology_enrichment_celltype=CL:0000738!4.50e-33!140;CL:0002087!3.93e-28!119;CL:0002031!8.20e-27!124;CL:0000037!1.27e-26!172;CL:0000566!1.27e-26!172;CL:0000988!1.17e-25!182;CL:0002032!6.31e-24!165;CL:0000837!6.31e-24!165;CL:0000542!1.86e-17!53;CL:0000051!1.86e-17!53;CL:0000838!4.05e-17!52;CL:0000766!4.39e-14!76;CL:0002057!1.05e-12!42;CL:0000557!6.83e-12!71;CL:0000860!1.11e-11!45;CL:0002009!8.12e-11!65;CL:0000791!1.21e-10!18;CL:0000789!1.21e-10!18;CL:0002420!1.21e-10!18;CL:0002419!1.21e-10!18;CL:0000790!1.21e-10!18;CL:0002194!4.70e-10!63;CL:0000576!4.70e-10!63;CL:0000040!4.70e-10!63;CL:0000559!4.70e-10!63;CL:0000839!5.15e-10!70;CL:0000763!4.89e-09!112;CL:0000049!4.89e-09!112;CL:0000084!5.79e-09!25;CL:0000827!5.79e-09!25;CL:0000236!5.73e-08!14;CL:0002320!7.61e-08!365;CL:0000945!9.55e-08!24;CL:0000826!9.55e-08!24;CL:0000625!1.80e-07!11;CL:0000134!3.40e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000542;4.33e-13;53!CL:0000791;1.62e-12;18!CL:0000789;1.62e-12;18!CL:0002419;1.62e-12;18!CL:0000084;4.85e-11;25!CL:0002087;5.40e-10;104!CL:0000236;1.74e-09;13!CL:0000738;5.59e-09;136!CL:0000625;6.71e-09;11!CL:0000860;2.76e-08;33!CL:0002057;2.76e-08;33!CL:0000945;3.18e-08;24!CL:0000766;5.39e-08;69!CL:0000473;7.38e-08;39!CL:0000234;7.38e-08;39!CL:0000576;1.11e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.29e-42,136;CL:0002087,1.38e-34,115;CL:0002031,3.20e-33,120;CL:0000037,3.73e-33,168;CL:0000988,1.13e-32,177;CL:0002032,9.36e-30,161;CL:0000837,9.36e-30,161;CL:0000542,1.30e-20,53;CL:0000051,1.30e-20,53;CL:0000838,3.45e-20,52;CL:0000766,5.12e-18,72;CL:0000473,2.69e-15,48;CL:0000234,2.69e-15,48;CL:0000557,3.45e-15,67;CL:0000860,2.17e-14,42;CL:0002057,2.17e-14,42;CL:0002009,1.79e-13,61;CL:0000839,1.21e-12,66;CL:0000791,1.59e-12,18;CL:0000789,1.59e-12,18;CL:0002420,1.59e-12,18;CL:0002419,1.59e-12,18;CL:0000790,1.59e-12,18;CL:0002194,1.70e-12,59;CL:0000576,1.70e-12,59;CL:0000040,1.70e-12,59;CL:0000559,1.70e-12,59;CL:0000763,2.10e-11,108;CL:0000049,2.10e-11,108;CL:0002320,2.74e-11,361;CL:0000084,4.55e-11,25;CL:0000827,4.55e-11,25;CL:0000134,3.13e-10,354;CL:0000236,1.39e-09,14;CL:0000625,5.81e-09,11;CL:0000219,1.17e-08,386;CL:0000945,2.53e-08,24;CL:0000826,2.53e-08,24;CL:0002393,8.52e-08,9;CL:0002397,8.52e-08,9;CL:0000094,9.45e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000051;4.33e-13;53!CL:0000790;1.62e-12;18!CL:0002057;3.67e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.87e-17!102;UBERON:0003061!3.87e-17!102;UBERON:0002193!1.37e-13!112;UBERON:0002371!1.51e-10!80;UBERON:0001474!4.50e-10!86;UBERON:0004765!7.16e-09!101;UBERON:0001434!7.16e-09!101;UBERON:0000178!4.54e-08!15;UBERON:0000179!4.54e-08!15;UBERON:0000463!4.54e-08!15;UBERON:0002384!2.15e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.10e-09;15!UBERON:0000179;1.10e-09;15!UBERON:0000463;1.10e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.24e-21,98;UBERON:0003061,1.24e-21,98;UBERON:0002193,1.55e-18,108;UBERON:0002371,1.93e-13,76;UBERON:0004765,9.88e-13,90;UBERON:0001474,2.30e-12,82;UBERON:0002405,6.10e-12,93;UBERON:0001434,4.89e-11,100;UBERON:0002384,1.09e-10,371;UBERON:0000178,1.04e-09,15;UBERON:0000179,1.04e-09,15;UBERON:0000463,1.04e-09,15 | |||
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| ||
|short_description=p2@CU678639,p2@CU679368 | |||
}} | }} |
Latest revision as of 03:48, 26 July 2015
Short description: | p2@CU678639, p2@CU679368 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CU678639_5end, CAGE_peak_2_at_CU679368_5end |
Coexpression cluster: | C1809_CD4_Peripheral_normal_Neutrophils_CD8_Natural_CD14 |
Association with transcript: | 169bp_to_CU678639, CU679368_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.24e-21 | 98 |
blood island | 1.24e-21 | 98 |
hemolymphoid system | 1.55e-18 | 108 |
bone marrow | 1.93e-13 | 76 |
skeletal element | 9.88e-13 | 90 |
bone element | 2.30e-12 | 82 |
immune system | 6.10e-12 | 93 |
skeletal system | 4.89e-11 | 100 |
connective tissue | 1.09e-10 | 371 |
blood | 1.04e-09 | 15 |
haemolymphatic fluid | 1.04e-09 | 15 |
organism substance | 1.04e-09 | 15 |