FFCP PHASE1:Hg19::chr19:18476053..18476056,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:18476053..18476056,+
|short_description=p@chr19:18476053..18476056,+
|description=CAGE_peak_at_chr19:18476053..18476056,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:18476053..18476056,+ | |||
|description=CAGE_peak_at_chr19:18476053..18476056,+ | |||
|id=chr19:18476053..18476056,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.55e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002567;6.20e-25;3!CL:0002262;2.37e-10;2!CL:0000771;2.37e-10;2!CL:1000398;2.37e-10;2!CL:0000148;3.62e-08;10!CL:0000182;5.98e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,6.22e-25,3;CL:0002262,2.72e-10,2;CL:1000398,2.72e-10,2;CL:0000771,2.99e-10,2;CL:0000148,3.63e-08,10;CL:0000541,3.63e-08,10;CL:0000182,5.81e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001280;6.20e-25;3!UBERON:0004647;6.20e-25;3!UBERON:0001282;2.47e-19;1!UBERON:0009842;2.47e-19;1!UBERON:0003704;2.47e-19;1!UBERON:0001171;2.47e-19;1!UBERON:0001172;2.47e-19;1!UBERON:0001281;2.37e-10;2!UBERON:0003497;2.37e-10;2!UBERON:0003909;2.37e-10;2!UBERON:0003835;2.37e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001280,5.50e-25,3;UBERON:0004647,5.50e-25,3;UBERON:0005171,5.50e-25,3;UBERON:0001282,1.56e-19,1;UBERON:0009842,1.56e-19,1;UBERON:0003704,1.56e-19,1;UBERON:0001171,1.56e-19,1;UBERON:0001172,1.56e-19,1;UBERON:0002394,5.11e-13,6;UBERON:0003928,5.11e-13,6;UBERON:0001281,2.72e-10,2;UBERON:0003497,2.72e-10,2;UBERON:0003909,2.72e-10,2;UBERON:0003835,2.72e-10,2;UBERON:0002294,5.42e-09,9;UBERON:0001173,5.42e-09,9;UBERON:0004912,5.42e-09,9 | |||
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| ||
|short_description=p@chr19:18476053..18476056,+ | |||
}} | }} |
Latest revision as of 05:10, 26 July 2015
Short description: | p@chr19:18476053..18476056, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18476053..18476056, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 6.22e-25 | 3 |
endothelial cell of sinusoid | 2.72e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.72e-10 | 2 |
eosinophil | 2.99e-10 | 2 |
melanocyte | 3.63e-08 | 10 |
melanoblast | 3.63e-08 | 10 |
hepatocyte | 5.81e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
liver parenchyma | 5.50e-25 | 3 |
liver lobule | 5.50e-25 | 3 |
hepatic duct | 5.50e-25 | 3 |
intralobular bile duct | 1.56e-19 | 1 |
acinus | 1.56e-19 | 1 |
intrahepatic bile duct | 1.56e-19 | 1 |
portal lobule | 1.56e-19 | 1 |
hepatic acinus | 1.56e-19 | 1 |
bile duct | 5.11e-13 | 6 |
digestive system duct | 5.11e-13 | 6 |
hepatic sinusoid | 2.72e-10 | 2 |
abdomen blood vessel | 2.72e-10 | 2 |
sinusoid | 2.72e-10 | 2 |
abdominal segment blood vessel | 2.72e-10 | 2 |
biliary system | 5.42e-09 | 9 |
biliary tree | 5.42e-09 | 9 |
biliary bud | 5.42e-09 | 9 |