FFCP PHASE1:Hg19::chr19:18704082..18704116,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18704082..18704116,- | |||
|coexpression_cluster_id=C3767 | |||
|description=CAGE_peak_at_chr19:18704082..18704116,- | |description=CAGE_peak_at_chr19:18704082..18704116,- | ||
|id=chr19:18704082..18704116,- | |id=chr19:18704082..18704116,- | ||
|ontology_enrichment_celltype=CL:0000153!4.30e-17!9;CL:0000447!4.30e-17!9;CL:0000515!7.50e-13!4;CL:0002334!2.00e-12!12;CL:0002580!1.25e-10!3;CL:0000214!1.33e-10!3;CL:0000327!1.44e-10!14;CL:0002579!3.74e-10!3;CL:0000499!8.23e-10!27;CL:0000667!6.00e-09!6;CL:0000058!6.00e-09!6;CL:0000138!6.00e-09!6;CL:0002617!8.40e-08!2 | |ontology_enrichment_celltype=CL:0000153!4.30e-17!9;CL:0000447!4.30e-17!9;CL:0000515!7.50e-13!4;CL:0002334!2.00e-12!12;CL:0002580!1.25e-10!3;CL:0000214!1.33e-10!3;CL:0000327!1.44e-10!14;CL:0002579!3.74e-10!3;CL:0000499!8.23e-10!27;CL:0000667!6.00e-09!6;CL:0000058!6.00e-09!6;CL:0000138!6.00e-09!6;CL:0002617!8.40e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002580;5.61e-30;3!CL:0002334;1.43e-29;12!CL:0000228;4.10e-23;1!CL:0002581;4.10e-23;1!CL:0002372;4.10e-23;1!CL:0002617;2.07e-12;2!CL:0002579;8.96e-09;3!CL:0002615;9.66e-09;3!CL:0000136;8.59e-08;13!CL:0000056;9.10e-07;4!CL:0000737;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,8.74e-30,3;CL:0002334,1.54e-29,12;CL:0002581,2.62e-23,1;CL:0000228,4.10e-23,1;CL:0002372,4.10e-23,1;CL:0002617,2.07e-12,2;CL:0002579,8.96e-09,3;CL:0002615,9.66e-09,3;CL:0000136,7.20e-07,15;CL:0000737,9.11e-07,4;CL:0000515,9.11e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;9.10e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!4.39e-16!12;UBERON:0000042!4.39e-16!12;UBERON:0003688!2.75e-13!6;UBERON:0002358!2.75e-13!6;UBERON:0003684!2.75e-13!6;UBERON:0001178!2.75e-13!6;UBERON:0006915!1.33e-10!3;UBERON:0002018!1.33e-10!3;UBERON:0002217!1.33e-10!3;UBERON:0007616!1.33e-10!3;UBERON:0002771!2.97e-09!3;UBERON:0000310!3.86e-08!10;UBERON:0001443!2.33e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.18e-20;10!UBERON:0001443;1.32e-18;11!UBERON:0003688;7.79e-16;6!UBERON:0002358;7.79e-16;6!UBERON:0003684;7.79e-16;6!UBERON:0001178;7.79e-16;6!UBERON:0005406;2.90e-12;2!UBERON:0004457;6.87e-11;9!UBERON:0000042;6.87e-11;9!UBERON:0001013;2.77e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.66e-20,10;UBERON:0001443,1.58e-18,11;UBERON:0003688,7.79e-16,6;UBERON:0002358,7.79e-16,6;UBERON:0003684,7.79e-16,6;UBERON:0001178,7.79e-16,6;UBERON:0005406,2.32e-12,2;UBERON:0004457,2.12e-08,12;UBERON:0000042,2.12e-08,12;UBERON:0001013,2.60e-07,14 | |||
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|phase1_expression=3.99692434395225,0.856402095563933,5.21531295155093,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0.50133791063589,0.579386075843295,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744467425326359,0,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.723906533337896,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,1.38115775959256,0.561320188866147,6.53509661204075,0.511707249066704,0.160853921143607,1.48418066444991,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.13480708770837,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0.788857810965923,0.0679914901909147,0,0,0.371995018166751,0.462175628631418,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr19:18704082..18704116,- | |short_description=p@chr19:18704082..18704116,- | ||
}} | }} |
Latest revision as of 05:16, 26 July 2015
Short description: | p@chr19:18704082..18704116, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18704082..18704116, - |
Coexpression cluster: | C3767_Preadipocyte_Mesenchymal_Adipocyte_Chondrocyte_Pericytes_Fibroblast_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 8.74e-30 | 3 |
preadipocyte | 1.54e-29 | 12 |
perirenal preadipocyte | 2.62e-23 | 1 |
multinucleate cell | 4.10e-23 | 1 |
myotube | 4.10e-23 | 1 |
adipocyte of breast | 2.07e-12 | 2 |
omentum preadipocyte | 8.96e-09 | 3 |
adipocyte of omentum tissue | 9.66e-09 | 3 |
fat cell | 7.20e-07 | 15 |
striated muscle cell | 9.11e-07 | 4 |
skeletal muscle myoblast | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
breast | 2.66e-20 | 10 |
chest | 1.58e-18 | 11 |
omentum | 7.79e-16 | 6 |
peritoneum | 7.79e-16 | 6 |
abdominal cavity | 7.79e-16 | 6 |
visceral peritoneum | 7.79e-16 | 6 |
perirenal fat | 2.32e-12 | 2 |
cavity lining | 2.12e-08 | 12 |
serous membrane | 2.12e-08 | 12 |
adipose tissue | 2.60e-07 | 14 |