FFCP PHASE1:Hg19::chr19:39901389..39901406,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:39901389..39901406,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr19:39901389..39901406,+ | |||
|id=chr19:39901389..39901406,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.31e-36!140;CL:0002057!4.89e-29!42;CL:0000860!7.56e-28!45;CL:0002087!1.45e-27!119;CL:0002031!2.90e-27!124;CL:0000037!1.21e-25!172;CL:0000566!1.21e-25!172;CL:0000766!4.07e-24!76;CL:0002032!2.09e-23!165;CL:0000837!2.09e-23!165;CL:0000988!7.17e-23!182;CL:0000557!1.68e-20!71;CL:0002009!7.49e-20!65;CL:0000839!1.76e-18!70;CL:0002194!2.87e-18!63;CL:0000576!2.87e-18!63;CL:0000040!2.87e-18!63;CL:0000559!2.87e-18!63;CL:0000763!1.37e-15!112;CL:0000049!1.37e-15!112;CL:0002393!3.35e-12!9;CL:0002397!3.35e-12!9;CL:0000134!6.73e-11!358;CL:0002320!1.35e-10!365;CL:0000219!3.63e-09!390;CL:0000838!6.00e-08!52;CL:0000542!1.13e-07!53;CL:0000051!1.13e-07!53;CL:0000063!9.11e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000576;3.88e-22;48!CL:0000860;4.69e-20;33!CL:0002057;4.69e-20;33!CL:0002393;2.48e-18;6!CL:0002397;2.48e-18;6!CL:0000771;3.96e-15;2!CL:0000094;4.00e-14;8!CL:0000473;4.46e-14;39!CL:0000234;4.46e-14;39!CL:0000766;1.29e-12;69!CL:0000081;2.62e-10;11!CL:0000775;4.18e-10;3!CL:0000226;5.86e-10;3!CL:0000842;5.86e-10;3!CL:0000738;2.86e-09;136!CL:0002087;3.17e-08;104!CL:0000988;5.33e-07;177!CL:0000763;7.88e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.34e-37,42;CL:0002057,2.34e-37,42;CL:0000766,7.64e-33,72;CL:0000473,2.69e-32,48;CL:0000234,2.69e-32,48;CL:0000738,2.02e-28,136;CL:0002194,3.30e-25,59;CL:0000576,3.30e-25,59;CL:0000040,3.30e-25,59;CL:0000559,3.30e-25,59;CL:0002009,2.71e-24,61;CL:0002087,1.57e-23,115;CL:0000839,3.03e-22,66;CL:0000037,3.76e-22,168;CL:0000557,7.16e-22,67;CL:0000988,8.60e-21,177;CL:0000763,1.07e-20,108;CL:0000049,1.07e-20,108;CL:0002032,2.63e-19,161;CL:0000837,2.63e-19,161;CL:0002393,1.75e-18,9;CL:0002397,1.75e-18,9;CL:0002031,5.27e-18,120;CL:0000771,3.70e-15,2;CL:0000094,3.63e-14,8;CL:0000081,2.44e-10,11;CL:0000775,3.82e-10,3;CL:0000226,4.18e-10,3;CL:0000842,4.18e-10,3;CL:0000134,6.54e-09,354;CL:0002320,1.22e-08,361;CL:0000219,1.09e-07,386;CL:0000048,2.39e-07,427;CL:0000723,3.56e-07,433;CL:0000034,5.98e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.69e-25;42!UBERON:0010115;2.80e-08;1!CL:0000049;4.77e-08;108!UBERON:0006242;6.62e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.17e-17!80;UBERON:0002390!2.07e-17!102;UBERON:0003061!2.07e-17!102;UBERON:0001474!1.72e-15!86;UBERON:0002193!1.70e-14!112;UBERON:0004765!8.68e-14!101;UBERON:0001434!8.68e-14!101;UBERON:0002405!3.48e-12!115;UBERON:0002384!2.10e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;2.80e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.04e-19,76;UBERON:0002390,2.95e-18,98;UBERON:0003061,2.95e-18,98;UBERON:0001474,2.39e-17,82;UBERON:0002193,2.97e-16,108;UBERON:0004765,1.52e-15,90;UBERON:0002405,6.01e-15,93;UBERON:0001434,1.08e-13,100;UBERON:0002384,2.84e-08,371;UBERON:0002363,3.34e-08,1;UBERON:0007645,3.34e-08,1;UBERON:0007647,3.34e-08,1;UBERON:0010115,3.34e-08,1;UBERON:0002204,4.19e-08,167;UBERON:0003081,4.53e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0,0.77408061658038,0,0,0,0.154934401160603,0,0,1.10799081706375,4.01088894940283,1.51907609501096,0,0,0,0.436194716338694,0.755751887377619,0.485168122375632,0.697287110717054,0,0.929119112685311,1.7261543539329,0.512321413058201,1.18241114944293,0,0,0,0.752969358170419,1.36453075028923,0.224723484445085,0,0,1.91801137739712,0.659702600373432,1.39624560335142,2.13112375266347,1.7412554317715,0,0.622822248995575,1.00499466102697,3.12889751052121,0.434377689410233,0,0,0.316462387440884,0.633765858935825,2.55125159958052,0.628975936525128,1.68492946719743,1.50176892841506,0.803627933485401,1.14005097496499,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,1.14681968437569,0,0,0,0.196709770113833,0.393010762749165,2.67281948699362,0,0.32592226663359,0,0,0.111410456885174,0,0.221533894583621,0,0.25618263945135,0.390178042679635,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0.604820229674197,1.33720097891754,0.434473211648397,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0.397227542439656,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0.504867548488229,0,0,1.06502877754984,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0.576479813667846,0.25248486685276,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.985153801009636,0.431255149719035,0.898401253958239,0,0,0,0,0,1.49801404789436,11.966458368161,0,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,1.86091223510599,2.15714200818617,0.74709290462411,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0.245040215981032,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.445234820091624,0,0.211125408127993,0.796991953004279,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0.391329237864179,0.242780379534093,0,0,0,2.0851571277401,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0.146178634172371,0,0,0,0,0,0,0,0.391102765469606,0,1.49417096317547,0.19980960958213,0.144090417154106,0,0.857974989309823,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0.196854963029498,0.169346664131569,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0.0788057072991982,0,0,0,0.767660789277781,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0.13223260174269,0.171086837884329,0.704815022316672,0.320362237703084,0,0,0,0,0.121792598380896,0,0,0,0,0.655745261419609,0,0,0.122026264901963,0,0,0.110929051536852,0.18628920882415,0,0.124980407962107,0,0,0.235265819698172,0,0,0.149254802886874,0.467426619694449,0.554805861502613,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0,0,0.211312123358627,0,0,0.172214979660816,0.567515953566836,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0.994753875806841,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0,0.315543124386369,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0.320182037633146,0,0.179650404213174,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr19:39901389..39901406,+ | |||
}} |
Latest revision as of 07:39, 26 July 2015
Short description: | p@chr19:39901389..39901406, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39901389..39901406, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.04e-19 | 76 |
hematopoietic system | 2.95e-18 | 98 |
blood island | 2.95e-18 | 98 |
bone element | 2.39e-17 | 82 |
hemolymphoid system | 2.97e-16 | 108 |
skeletal element | 1.52e-15 | 90 |
immune system | 6.01e-15 | 93 |
skeletal system | 1.08e-13 | 100 |
connective tissue | 2.84e-08 | 371 |
dura mater | 3.34e-08 | 1 |
future meninx | 3.34e-08 | 1 |
ectomeninx | 3.34e-08 | 1 |
future dura mater | 3.34e-08 | 1 |
musculoskeletal system | 4.19e-08 | 167 |
lateral plate mesoderm | 4.53e-08 | 203 |