FFCP PHASE1:Hg19::chr19:42827784..42827798,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:42827784..42827798,+
|short_description=p@chr19:42827784..42827798,+
|description=CAGE_peak_at_chr19:42827784..42827798,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:42827784..42827798,+ | |||
|coexpression_cluster_id=C3799 | |||
|description=CAGE_peak_at_chr19:42827784..42827798,+ | |||
|id=chr19:42827784..42827798,+ | |||
|ontology_enrichment_celltype=CL:0002322!8.76e-15!5;CL:1000507!8.01e-10!12;CL:1000494!8.01e-10!12;CL:1000449!3.66e-09!16;CL:1000497!5.53e-08!18;CL:0002518!5.53e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.72e-71;5!CL:0002321;9.63e-24;15!CL:0000148;2.56e-13;10!CL:0000540;2.29e-10;6!CL:0000404;2.29e-10;6!CL:0000147;1.11e-09;14!CL:0000710;6.17e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.73e-71,5;CL:0000148,2.56e-13,10;CL:0000541,2.56e-13,10;CL:0000540,2.29e-10,6;CL:0000031,2.29e-10,6;CL:0000404,2.29e-10,6;CL:0000147,1.11e-09,14;CL:0000047,5.37e-08,8;CL:0000710,6.17e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.07e-15;1!CL:0000031;2.29e-10;6!UBERON:0007297;1.67e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003887!1.75e-12!21;UBERON:0000080!2.77e-10!18;UBERON:0002120!2.77e-10!18;UBERON:0004875!2.77e-10!18;UBERON:0005721!2.77e-10!18;UBERON:0005754!2.77e-10!18;UBERON:0007297!2.77e-10!18;UBERON:0009773!8.01e-10!12;UBERON:0001231!8.01e-10!12;UBERON:0004810!8.01e-10!12;UBERON:0004211!3.66e-09!16;UBERON:0001285!3.66e-09!16;UBERON:0007684!3.66e-09!16;UBERON:0003220!3.66e-09!16;UBERON:0004208!3.66e-09!16;UBERON:0004876!4.50e-09!20;UBERON:0003135!7.39e-09!11;UBERON:0000473!8.44e-09!8;UBERON:0006555!1.54e-08!17;UBERON:0005103!1.54e-08!17;UBERON:0000083!1.54e-08!17;UBERON:0009201!1.54e-08!17;UBERON:0004819!1.54e-08!17;UBERON:0006553!1.54e-08!17;UBERON:0003074!1.54e-08!17;UBERON:0003060!1.54e-08!17;UBERON:0000058!2.90e-08!26;UBERON:0000489!1.40e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.43e-20;3!UBERON:0004054;4.43e-20;3!UBERON:0001000;1.07e-15;1!UBERON:0000998;1.07e-15;1!UBERON:0006868;1.07e-15;1!UBERON:0005352;1.07e-15;1!UBERON:0005904;2.56e-15;4!UBERON:0003135;2.35e-12;11!UBERON:0001905;2.87e-08;2!UBERON:0002757;2.87e-08;2!UBERON:0010134;2.87e-08;2!UBERON:0005408;2.87e-08;2!UBERON:0001899;2.87e-08;2!UBERON:0000473;4.04e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.43e-20,3;UBERON:0004054,4.43e-20,3;UBERON:0000998,8.63e-16,1;UBERON:0006868,8.63e-16,1;UBERON:0001000,1.34e-15,1;UBERON:0005352,1.34e-15,1;UBERON:0005904,2.56e-15,4;UBERON:0003135,2.39e-12,11;UBERON:0001905,3.08e-08,2;UBERON:0002757,3.08e-08,2;UBERON:0010134,3.08e-08,2;UBERON:0005408,3.08e-08,2;UBERON:0001899,3.08e-08,2;UBERON:0000473,3.90e-08,8 | |||
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| ||
|short_description=p@chr19:42827784..42827798,+ | |||
}} | }} |
Latest revision as of 08:56, 26 July 2015
Short description: | p@chr19:42827784..42827798, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:42827784..42827798, + |
Coexpression cluster: | C3799_gastrointestinal_H9_testicular_iPS_ductus_seminal_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.73e-71 | 5 |
melanocyte | 2.56e-13 | 10 |
melanoblast | 2.56e-13 | 10 |
neuron | 2.29e-10 | 6 |
neuroblast | 2.29e-10 | 6 |
electrically signaling cell | 2.29e-10 | 6 |
pigment cell | 1.11e-09 | 14 |
neuronal stem cell | 5.37e-08 | 8 |
neurecto-epithelial cell | 6.17e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 4.43e-20 | 3 |
internal male genitalia | 4.43e-20 | 3 |
seminal vesicle | 8.63e-16 | 1 |
seminal fluid secreting gland | 8.63e-16 | 1 |
vas deferens | 1.34e-15 | 1 |
spermatic cord | 1.34e-15 | 1 |
duct of male reproductive system | 2.56e-15 | 4 |
male reproductive organ | 2.39e-12 | 11 |
pineal body | 3.08e-08 | 2 |
regional part of epithalamus | 3.08e-08 | 2 |
secretory circumventricular organ | 3.08e-08 | 2 |
circumventricular organ | 3.08e-08 | 2 |
epithalamus | 3.08e-08 | 2 |
testis | 3.90e-08 | 8 |