FFCP PHASE1:Hg19::chr19:45248240..45248263,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:45248240..45248263,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr19:45248240..45248263,+ | |description=CAGE_peak_at_chr19:45248240..45248263,+ | ||
|id=chr19:45248240..45248263,+ | |id=chr19:45248240..45248263,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000135;1.30e-20;3!CL:0000388;1.30e-20;3!CL:0000214;6.13e-10;3!CL:0000174;1.07e-09;3!CL:0000511;6.85e-08;1!CL:0002625;6.85e-08;1!CL:0002174;6.85e-08;1!CL:0000216;6.85e-08;1!CL:0002591;6.85e-08;1!CL:0000501;6.85e-08;1!CL:1000306;1.16e-07;4!CL:0002547;1.16e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,7.62e-21,3;CL:0000388,7.62e-21,3;CL:0000214,5.24e-10,3;CL:0000174,1.12e-09,3;CL:0002174,4.11e-08,1;CL:0000501,4.11e-08,1;CL:0000511,4.71e-08,1;CL:0002625,4.71e-08,1;CL:0000216,4.71e-08,1;CL:1000306,9.64e-08,4;CL:0002547,9.64e-08,4;CL:0002591,1.06e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.90e-08;1!UBERON:0005062;5.99e-08;4!UBERON:0007284;5.99e-08;4!UBERON:0010115;6.85e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.70e-08!115;UBERON:0000926!3.11e-07!448;UBERON:0004120!3.11e-07!448;UBERON:0006603!3.11e-07!448 | |ontology_enrichment_uberon=UBERON:0007023!3.70e-08!115;UBERON:0000926!3.11e-07!448;UBERON:0004120!3.11e-07!448;UBERON:0006603!3.11e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.30e-20;3!UBERON:0000043;1.30e-20;3!UBERON:0007845;1.30e-20;3!UBERON:0002133;4.88e-15;2!UBERON:0003978;2.53e-10;3!UBERON:0000946;2.53e-10;3!UBERON:0006915;6.13e-10;3!UBERON:0007616;6.13e-10;3!UBERON:0002217;6.13e-10;3!UBERON:0002018;6.13e-10;3!UBERON:0002134;1.77e-08;1!UBERON:0005208;1.77e-08;1!UBERON:0004145;1.77e-08;1!UBERON:0005946;1.77e-08;1!UBERON:0005965;1.77e-08;1!UBERON:0002078;1.77e-08;1!UBERON:0001154;2.90e-08;1!UBERON:0002135;2.90e-08;1!UBERON:0001153;2.90e-08;1!UBERON:0009854;2.90e-08;1!UBERON:0002363;6.85e-08;1!UBERON:0002372;6.85e-08;1!UBERON:0001136;6.85e-08;1!UBERON:0001343;6.85e-08;1!UBERON:0001961;6.85e-08;1!UBERON:0001744;6.85e-08;1!UBERON:0004910;6.85e-08;1!UBERON:0004813;6.85e-08;1!UBERON:0001042;6.85e-08;1!UBERON:0001735;6.85e-08;1!UBERON:0004797;1.16e-07;4!UBERON:0000415;1.16e-07;4!UBERON:0007240;1.16e-07;4!UBERON:0005742;1.16e-07;4!UBERON:0005734;1.16e-07;4!UBERON:0004664;1.16e-07;4!UBERON:0004663;1.16e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,7.62e-21,3;UBERON:0000043,7.62e-21,3;UBERON:0007845,7.62e-21,3;UBERON:0004797,5.54e-16,7;UBERON:0002133,5.62e-15,2;UBERON:0003978,2.78e-10,3;UBERON:0009751,2.78e-10,3;UBERON:0000946,2.78e-10,3;UBERON:0002523,2.78e-10,3;UBERON:0005983,2.78e-10,3;UBERON:0002165,2.78e-10,3;UBERON:0002062,2.78e-10,3;UBERON:0007280,2.78e-10,3;UBERON:0006915,5.24e-10,3;UBERON:0007616,5.24e-10,3;UBERON:0002217,5.24e-10,3;UBERON:0002018,5.24e-10,3;UBERON:0004145,6.00e-10,3;UBERON:0002134,1.77e-08,1;UBERON:0005208,1.77e-08,1;UBERON:0005946,1.77e-08,1;UBERON:0005965,1.77e-08,1;UBERON:0002078,1.77e-08,1;UBERON:0001154,2.52e-08,1;UBERON:0001153,2.52e-08,1;UBERON:0001045,2.52e-08,1;UBERON:0002135,3.34e-08,1;UBERON:0001136,4.71e-08,1;UBERON:0001343,4.71e-08,1;UBERON:0004910,4.71e-08,1;UBERON:0005154,4.71e-08,1;UBERON:0005295,4.71e-08,1;UBERON:0004813,4.71e-08,1;UBERON:0005297,4.71e-08,1;UBERON:0005294,4.71e-08,1;UBERON:0010141,4.71e-08,1;UBERON:0005891,4.71e-08,1;UBERON:0002372,9.29e-08,1;UBERON:0001961,9.29e-08,1;UBERON:0001744,9.29e-08,1;UBERON:0001735,9.29e-08,1;UBERON:0000415,9.64e-08,4;UBERON:0007240,9.64e-08,4;UBERON:0005742,9.64e-08,4;UBERON:0005734,9.64e-08,4;UBERON:0004664,9.64e-08,4;UBERON:0004663,9.64e-08,4;UBERON:0002363,9.94e-08,1;UBERON:0007645,9.94e-08,1;UBERON:0007647,9.94e-08,1;UBERON:0010115,9.94e-08,1 | |||
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|short_description=p@chr19:45248240..45248263,+ | |short_description=p@chr19:45248240..45248263,+ | ||
}} | }} |
Latest revision as of 14:42, 27 July 2015
Short description: | p@chr19:45248240..45248263, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45248240..45248263, + |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 7.62e-21 | 3 |
tendon cell | 7.62e-21 | 3 |
synovial cell | 5.24e-10 | 3 |
steroid hormone secreting cell | 1.12e-09 | 3 |
follicular cell of ovary | 4.11e-08 | 1 |
granulosa cell | 4.11e-08 | 1 |
androgen binding protein secreting cell | 4.71e-08 | 1 |
seminiferous tubule epithelial cell | 4.71e-08 | 1 |
Sertoli cell | 4.71e-08 | 1 |
fibroblast of tunica adventitia of artery | 9.64e-08 | 4 |
fibroblast of the aortic adventitia | 9.64e-08 | 4 |
smooth muscle cell of the pulmonary artery | 1.06e-07 | 1 |