FFCP PHASE1:Hg19::chr19:45248240..45248263,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:45248240..45248263,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr19:45248240..45248263,+ | |||
|id=chr19:45248240..45248263,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.30e-20;3!CL:0000388;1.30e-20;3!CL:0000214;6.13e-10;3!CL:0000174;1.07e-09;3!CL:0000511;6.85e-08;1!CL:0002625;6.85e-08;1!CL:0002174;6.85e-08;1!CL:0000216;6.85e-08;1!CL:0002591;6.85e-08;1!CL:0000501;6.85e-08;1!CL:1000306;1.16e-07;4!CL:0002547;1.16e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,7.62e-21,3;CL:0000388,7.62e-21,3;CL:0000214,5.24e-10,3;CL:0000174,1.12e-09,3;CL:0002174,4.11e-08,1;CL:0000501,4.11e-08,1;CL:0000511,4.71e-08,1;CL:0002625,4.71e-08,1;CL:0000216,4.71e-08,1;CL:1000306,9.64e-08,4;CL:0002547,9.64e-08,4;CL:0002591,1.06e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.90e-08;1!UBERON:0005062;5.99e-08;4!UBERON:0007284;5.99e-08;4!UBERON:0010115;6.85e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.70e-08!115;UBERON:0000926!3.11e-07!448;UBERON:0004120!3.11e-07!448;UBERON:0006603!3.11e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.30e-20;3!UBERON:0000043;1.30e-20;3!UBERON:0007845;1.30e-20;3!UBERON:0002133;4.88e-15;2!UBERON:0003978;2.53e-10;3!UBERON:0000946;2.53e-10;3!UBERON:0006915;6.13e-10;3!UBERON:0007616;6.13e-10;3!UBERON:0002217;6.13e-10;3!UBERON:0002018;6.13e-10;3!UBERON:0002134;1.77e-08;1!UBERON:0005208;1.77e-08;1!UBERON:0004145;1.77e-08;1!UBERON:0005946;1.77e-08;1!UBERON:0005965;1.77e-08;1!UBERON:0002078;1.77e-08;1!UBERON:0001154;2.90e-08;1!UBERON:0002135;2.90e-08;1!UBERON:0001153;2.90e-08;1!UBERON:0009854;2.90e-08;1!UBERON:0002363;6.85e-08;1!UBERON:0002372;6.85e-08;1!UBERON:0001136;6.85e-08;1!UBERON:0001343;6.85e-08;1!UBERON:0001961;6.85e-08;1!UBERON:0001744;6.85e-08;1!UBERON:0004910;6.85e-08;1!UBERON:0004813;6.85e-08;1!UBERON:0001042;6.85e-08;1!UBERON:0001735;6.85e-08;1!UBERON:0004797;1.16e-07;4!UBERON:0000415;1.16e-07;4!UBERON:0007240;1.16e-07;4!UBERON:0005742;1.16e-07;4!UBERON:0005734;1.16e-07;4!UBERON:0004664;1.16e-07;4!UBERON:0004663;1.16e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,7.62e-21,3;UBERON:0000043,7.62e-21,3;UBERON:0007845,7.62e-21,3;UBERON:0004797,5.54e-16,7;UBERON:0002133,5.62e-15,2;UBERON:0003978,2.78e-10,3;UBERON:0009751,2.78e-10,3;UBERON:0000946,2.78e-10,3;UBERON:0002523,2.78e-10,3;UBERON:0005983,2.78e-10,3;UBERON:0002165,2.78e-10,3;UBERON:0002062,2.78e-10,3;UBERON:0007280,2.78e-10,3;UBERON:0006915,5.24e-10,3;UBERON:0007616,5.24e-10,3;UBERON:0002217,5.24e-10,3;UBERON:0002018,5.24e-10,3;UBERON:0004145,6.00e-10,3;UBERON:0002134,1.77e-08,1;UBERON:0005208,1.77e-08,1;UBERON:0005946,1.77e-08,1;UBERON:0005965,1.77e-08,1;UBERON:0002078,1.77e-08,1;UBERON:0001154,2.52e-08,1;UBERON:0001153,2.52e-08,1;UBERON:0001045,2.52e-08,1;UBERON:0002135,3.34e-08,1;UBERON:0001136,4.71e-08,1;UBERON:0001343,4.71e-08,1;UBERON:0004910,4.71e-08,1;UBERON:0005154,4.71e-08,1;UBERON:0005295,4.71e-08,1;UBERON:0004813,4.71e-08,1;UBERON:0005297,4.71e-08,1;UBERON:0005294,4.71e-08,1;UBERON:0010141,4.71e-08,1;UBERON:0005891,4.71e-08,1;UBERON:0002372,9.29e-08,1;UBERON:0001961,9.29e-08,1;UBERON:0001744,9.29e-08,1;UBERON:0001735,9.29e-08,1;UBERON:0000415,9.64e-08,4;UBERON:0007240,9.64e-08,4;UBERON:0005742,9.64e-08,4;UBERON:0005734,9.64e-08,4;UBERON:0004664,9.64e-08,4;UBERON:0004663,9.64e-08,4;UBERON:0002363,9.94e-08,1;UBERON:0007645,9.94e-08,1;UBERON:0007647,9.94e-08,1;UBERON:0010115,9.94e-08,1 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0.598390972864896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.289693037921647,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,2.64818361626438,1.43418310374407,0.354668382198357,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.423863802319124,0,0.309157587715317,0.772921620136887,0,0.168776332241266,0,0.252433774244115,0.184099797284599,0.323292113637624,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,3.80265104465493,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.297262324577456,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.328508624055237,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,1.6068392984416,0.193341436584244,0,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0.42793898803392,0.318203247925937,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0.551365343546124,0,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0,0,1.47775344708365,2.30506425071931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0.796991953004279,2.48655523978033,0,0,0,0.311039587661807,0,0,0,1.38100767891707,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,2.29989667708682,0.611030144933625,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,0,1.20990716048664,0,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.698906672968121,0,0,0.0730893170861856,0,0.484945082442097,0,0.225980740780532,0.137041924646751,0,0,0,0.240476460754601,0,0,0.144090417154106,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,1.71906176567983,0,2.23425921017803,0,5.0251111720377,0,0,0.223171457441873,0.335917362433631,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.104909176269996,0.316801009558219,0,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0,0,0,2.19828350517124,0,0.258565912723101,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0.612691153526923,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.298509605773748,0,1.66441758450784,0,0.754703705257725,3.55924488638614,0,0.302461847526478,0.466311601748341,0,0,1.34940933649081,0.310525913752519,0,0,0,0,0,0.406870733204662,0.363697318405119,0.107410557042488,1.39210127963548,0,0,0.343395705182793,0.336749488765919,0,0.192619830407303,1.07220795687463,0,0,0.231522474323834,0,0,0,0.438568099157414,0,0.578742114812744,0.337884881306145,0,0,0.303859956177382,0,0,0.132864840313363,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45967510406583,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.682986574053893,0,0,0,0,0,0.236387681767936,0,0.470958557103084,0.157115589916002,0,0,0.431855182437243,0.47775168788705,0.357382720883282,0,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,18.8304945783385,0.655678681511872,0,0.735444965261716,0,0,0,0,0,0.657887425858975,0.257831551894309,0,0.178553938605658,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,0,1.85997509083376,2.31087814315709,1.29787968637137,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0.103432995861895,0.852935927603924,0.23806443146374,0.129177819672012,0.0620747142958579,0.112131862580613,0.763765899337979,0.606351566874658,1.08858373948481,0,1.14498490124799,1.57788851863888,0.665320713092027,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr19:45248240..45248263,+ | |||
}} |
Latest revision as of 14:42, 27 July 2015
Short description: | p@chr19:45248240..45248263, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45248240..45248263, + |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 7.62e-21 | 3 |
tendon cell | 7.62e-21 | 3 |
synovial cell | 5.24e-10 | 3 |
steroid hormone secreting cell | 1.12e-09 | 3 |
follicular cell of ovary | 4.11e-08 | 1 |
granulosa cell | 4.11e-08 | 1 |
androgen binding protein secreting cell | 4.71e-08 | 1 |
seminiferous tubule epithelial cell | 4.71e-08 | 1 |
Sertoli cell | 4.71e-08 | 1 |
fibroblast of tunica adventitia of artery | 9.64e-08 | 4 |
fibroblast of the aortic adventitia | 9.64e-08 | 4 |
smooth muscle cell of the pulmonary artery | 1.06e-07 | 1 |