FFCP PHASE1:Hg19::chr19:47834063..47834081,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:47834063..47834081,+ | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_at_chr19:47834063..47834081,+ | |description=CAGE_peak_at_chr19:47834063..47834081,+ | ||
|id=chr19:47834063..47834081,+ | |id=chr19:47834063..47834081,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.92e-70!42;CL:0000766!9.56e-66!76;CL:0000860!1.08e-64!45;CL:0002194!1.41e-58!63;CL:0000576!1.41e-58!63;CL:0000040!1.41e-58!63;CL:0000559!1.41e-58!63;CL:0002009!2.07e-56!65;CL:0000839!3.91e-54!70;CL:0000557!3.35e-53!71;CL:0000763!4.75e-42!112;CL:0000049!4.75e-42!112;CL:0000738!7.83e-39!140;CL:0002087!3.60e-33!119;CL:0000037!8.18e-29!172;CL:0000566!8.18e-29!172;CL:0002031!4.75e-28!124;CL:0002032!1.62e-26!165;CL:0000837!1.62e-26!165;CL:0000988!2.07e-26!182;CL:0002393!4.07e-18!9;CL:0002397!4.07e-18!9;CL:0000094!1.43e-10!8;CL:0000875!4.84e-09!3;CL:0002396!4.84e-09!3;CL:0000767!3.69e-08!3;CL:0000842!9.74e-08!3;CL:0002619!9.97e-08!3;CL:0000081!1.85e-07!11;CL:0000134!4.48e-07!358 | |ontology_enrichment_celltype=CL:0002057!3.92e-70!42;CL:0000766!9.56e-66!76;CL:0000860!1.08e-64!45;CL:0002194!1.41e-58!63;CL:0000576!1.41e-58!63;CL:0000040!1.41e-58!63;CL:0000559!1.41e-58!63;CL:0002009!2.07e-56!65;CL:0000839!3.91e-54!70;CL:0000557!3.35e-53!71;CL:0000763!4.75e-42!112;CL:0000049!4.75e-42!112;CL:0000738!7.83e-39!140;CL:0002087!3.60e-33!119;CL:0000037!8.18e-29!172;CL:0000566!8.18e-29!172;CL:0002031!4.75e-28!124;CL:0002032!1.62e-26!165;CL:0000837!1.62e-26!165;CL:0000988!2.07e-26!182;CL:0002393!4.07e-18!9;CL:0002397!4.07e-18!9;CL:0000094!1.43e-10!8;CL:0000875!4.84e-09!3;CL:0002396!4.84e-09!3;CL:0000767!3.69e-08!3;CL:0000842!9.74e-08!3;CL:0002619!9.97e-08!3;CL:0000081!1.85e-07!11;CL:0000134!4.48e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.87e-62;33!CL:0002057;3.87e-62;33!CL:0000576;2.58e-60;48!CL:0000473;3.40e-47;39!CL:0000234;3.40e-47;39!CL:0000766;1.49e-37;69!CL:0000875;1.22e-19;3!CL:0002396;1.22e-19;3!CL:0000763;1.36e-17;100!CL:0002393;1.46e-16;6!CL:0002397;1.46e-16;6!CL:0002087;1.35e-13;104!CL:0000738;9.47e-11;136!CL:0000767;9.21e-09;3!CL:0000094;4.55e-07;8!CL:0000988;6.12e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.47e-98,42;CL:0002057,1.47e-98,42;CL:0000473,1.34e-85,48;CL:0000234,1.34e-85,48;CL:0000766,7.45e-73,72;CL:0002194,1.15e-72,59;CL:0000576,1.15e-72,59;CL:0000040,1.15e-72,59;CL:0000559,1.15e-72,59;CL:0002009,3.76e-70,61;CL:0000839,1.60e-64,66;CL:0000557,1.70e-63,67;CL:0000763,5.67e-47,108;CL:0000049,5.67e-47,108;CL:0000738,7.75e-39,136;CL:0002087,9.30e-38,115;CL:0002031,2.45e-33,120;CL:0002393,4.89e-33,9;CL:0002397,4.89e-33,9;CL:0000037,2.08e-30,168;CL:0002032,9.11e-30,161;CL:0000837,9.11e-30,161;CL:0000988,1.40e-28,177;CL:0000875,1.22e-19,3;CL:0002396,1.22e-19,3;CL:0000134,2.12e-11,354;CL:0002320,4.60e-11,361;CL:0000219,7.09e-10,386;CL:0000767,7.42e-09,3;CL:0000048,2.02e-08,427;CL:0000723,3.22e-08,433;CL:0000034,5.86e-08,441;CL:0000094,4.10e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;5.71e-74;42!CL:0000049;5.65e-16;108!UBERON:0010115;5.03e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.63e-46!80;UBERON:0002390!5.86e-45!102;UBERON:0003061!5.86e-45!102;UBERON:0001474!8.63e-42!86;UBERON:0002193!1.02e-39!112;UBERON:0004765!9.23e-34!101;UBERON:0001434!9.23e-34!101;UBERON:0002405!8.16e-33!115;UBERON:0002204!1.07e-17!167;UBERON:0003081!6.29e-16!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;5.03e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.87e-55,76;UBERON:0001474,4.62e-51,82;UBERON:0004765,4.20e-46,90;UBERON:0002390,3.53e-45,98;UBERON:0003061,3.53e-45,98;UBERON:0002405,1.84e-44,93;UBERON:0001434,5.23e-41,100;UBERON:0002193,1.56e-40,108;UBERON:0002204,2.30e-24,167;UBERON:0003081,4.50e-19,203;UBERON:0000926,2.35e-12,315;UBERON:0004120,2.35e-12,315;UBERON:0006603,2.35e-12,315;UBERON:0002384,1.33e-10,371;UBERON:0002363,6.97e-07,1;UBERON:0007645,6.97e-07,1;UBERON:0007647,6.97e-07,1;UBERON:0010115,6.97e-07,1 | |||
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|short_description=p@chr19:47834063..47834081,+ | |short_description=p@chr19:47834063..47834081,+ | ||
}} | }} |
Latest revision as of 15:29, 27 July 2015
Short description: | p@chr19:47834063..47834081, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:47834063..47834081, + |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.87e-55 | 76 |
bone element | 4.62e-51 | 82 |
skeletal element | 4.20e-46 | 90 |
hematopoietic system | 3.53e-45 | 98 |
blood island | 3.53e-45 | 98 |
immune system | 1.84e-44 | 93 |
skeletal system | 5.23e-41 | 100 |
hemolymphoid system | 1.56e-40 | 108 |
musculoskeletal system | 2.30e-24 | 167 |
lateral plate mesoderm | 4.50e-19 | 203 |
mesoderm | 2.35e-12 | 315 |
mesoderm-derived structure | 2.35e-12 | 315 |
presumptive mesoderm | 2.35e-12 | 315 |
connective tissue | 1.33e-10 | 371 |
dura mater | 6.97e-07 | 1 |
future meninx | 6.97e-07 | 1 |
ectomeninx | 6.97e-07 | 1 |
future dura mater | 6.97e-07 | 1 |