FFCP PHASE1:Hg19::chr19:49377002..49377019,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:49377002..49377019,+ | |||
|coexpression_cluster_id=C621 | |||
|description=CAGE_peak_at_chr19:49377002..49377019,+ | |description=CAGE_peak_at_chr19:49377002..49377019,+ | ||
|id=chr19:49377002..49377019,+ | |id=chr19:49377002..49377019,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.17e-25!42;CL:0000860!1.54e-23!45;CL:0000766!1.50e-20!76;CL:0000763!1.07e-17!112;CL:0000049!1.07e-17!112;CL:0000839!1.44e-17!70;CL:0000557!9.86e-17!71;CL:0002009!3.08e-15!65;CL:0000738!3.67e-15!140;CL:0000037!2.15e-14!172;CL:0000566!2.15e-14!172;CL:0002194!3.10e-14!63;CL:0000576!3.10e-14!63;CL:0000040!3.10e-14!63;CL:0000559!3.10e-14!63;CL:0002032!1.59e-13!165;CL:0000837!1.59e-13!165;CL:0000988!5.47e-13!182;CL:0002031!1.04e-12!124;CL:0000134!1.40e-10!358;CL:0002320!2.60e-10!365;CL:0002087!1.48e-09!119;CL:0000048!2.39e-08!430;CL:0000034!3.10e-08!444;CL:0000219!5.81e-08!390;CL:0000723!6.86e-08!436 | |ontology_enrichment_celltype=CL:0002057!3.17e-25!42;CL:0000860!1.54e-23!45;CL:0000766!1.50e-20!76;CL:0000763!1.07e-17!112;CL:0000049!1.07e-17!112;CL:0000839!1.44e-17!70;CL:0000557!9.86e-17!71;CL:0002009!3.08e-15!65;CL:0000738!3.67e-15!140;CL:0000037!2.15e-14!172;CL:0000566!2.15e-14!172;CL:0002194!3.10e-14!63;CL:0000576!3.10e-14!63;CL:0000040!3.10e-14!63;CL:0000559!3.10e-14!63;CL:0002032!1.59e-13!165;CL:0000837!1.59e-13!165;CL:0000988!5.47e-13!182;CL:0002031!1.04e-12!124;CL:0000134!1.40e-10!358;CL:0002320!2.60e-10!365;CL:0002087!1.48e-09!119;CL:0000048!2.39e-08!430;CL:0000034!3.10e-08!444;CL:0000219!5.81e-08!390;CL:0000723!6.86e-08!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.54e-45;33!CL:0002057;2.54e-45;33!CL:0000473;2.33e-32;39!CL:0000234;2.33e-32;39!CL:0000576;5.60e-27;48!CL:0000766;3.39e-21;69!CL:0000763;1.08e-13;100!CL:0002087;1.04e-10;104!CL:0000094;1.20e-10;8!CL:0000081;2.05e-09;11!CL:0000738;9.55e-09;136!CL:0000988;3.87e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.40e-51,42;CL:0002057,1.40e-51,42;CL:0000766,4.36e-46,72;CL:0000473,5.31e-46,48;CL:0000234,5.31e-46,48;CL:0000839,3.66e-40,66;CL:0000763,2.23e-39,108;CL:0000049,2.23e-39,108;CL:0000557,6.61e-39,67;CL:0002009,6.16e-37,61;CL:0000738,6.72e-37,136;CL:0000037,8.26e-35,168;CL:0002194,2.70e-34,59;CL:0000576,2.70e-34,59;CL:0000040,2.70e-34,59;CL:0000559,2.70e-34,59;CL:0000988,3.68e-33,177;CL:0002032,4.99e-33,161;CL:0000837,4.99e-33,161;CL:0002031,1.76e-31,120;CL:0002087,6.43e-26,115;CL:0000134,1.67e-15,354;CL:0002320,2.05e-15,361;CL:0000219,3.05e-12,386;CL:0000048,3.20e-11,427;CL:0000094,8.30e-11,8;CL:0000723,9.23e-11,433;CL:0000034,1.12e-10,441;CL:0000081,1.75e-09,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.88e-37;42!CL:0000049;1.02e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.76e-14!80;UBERON:0002390!1.50e-13!102;UBERON:0003061!1.50e-13!102;UBERON:0001474!9.66e-13!86;UBERON:0002193!5.19e-12!112;UBERON:0002405!2.58e-10!115;UBERON:0004765!1.13e-09!101;UBERON:0001434!1.13e-09!101;UBERON:0002384!1.70e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.74e-33,76;UBERON:0001474,7.19e-31,82;UBERON:0002390,8.27e-31,98;UBERON:0003061,8.27e-31,98;UBERON:0004765,2.23e-28,90;UBERON:0002193,1.33e-26,108;UBERON:0002405,2.23e-24,93;UBERON:0001434,3.39e-24,100;UBERON:0002384,2.11e-14,371;UBERON:0003081,1.39e-13,203;UBERON:0002204,1.87e-11,167 | |||
|phase1_expression=0.54503513781167,1.2846031433459,0,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,0.491467873003018,0,0,0,0,1.32558950291166,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0.152826811495903,0,0.157421562627358,1.96682138424452,1.15148819429164,1.39334510984468,0,0.30120591877825,1.47901604066715,0.154934401160603,0,0.293600439334847,3.32397245119126,19.853900299544,8.02940221648652,0.223915474239924,0,0.257575567634187,2.32637182047304,2.26725566213286,1.4555043671269,6.27558399645349,4.52284676824008,4.02618282163635,5.75384784644301,7.42866048934392,5.67557351732605,11.3766074643084,12.9096936716765,13.5426486594342,3.20011977222428,2.72906150057846,2.47195832889593,15.3041946185451,7.06043859567406,22.3767994029664,3.95821560224059,3.78980949481101,3.83602275479425,13.930043454172,9.07816359505824,10.5879782329248,9.54744927975624,8.86520961314342,4.99534342821768,12.1079900526674,9.94349617166425,7.59509729858123,0.845021145247767,1.70083439972035,0.628975936525128,0.898629049171961,1.20141514273205,0.16072558669708,0.855038231223746,0.19891667719909,1.27864907635244,0,0,0,0,0.400395987036012,0,0,0,1.1384259382189,1.76171156811282,4.20500550937752,1.32171328579026,0.560508562981536,0.526768169550154,0.786839080455332,10.6112905942274,5.14003747498773,0,0,0,0,0.222820913770347,0.294605907474837,1.32920336750173,0.541607727530031,0.128091319725675,0.130059347559878,0,0,0,0.444859689486181,0,2.09071047609954,0,0.766440987203842,0,0.506039384039006,0.318565414324097,0,0,0.301150238155546,0,0,0,0,1.41124720257313,6.95344509037119,2.46201486600758,0,0,0.12786256184353,0,0,0.289693037921647,0,0.973269740605272,0,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0,0.132957960518865,0.953962497221368,1.71598473234038,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0.488124115096339,0,0.81014194788176,0.0892997282840798,0,0,0,0,0.183201743930407,6.58902087180316,7.75560528296651,0,0.496971951695318,0.379891534993739,0.926864265692532,0.860509862246441,0,0,0,1.2333377420858,0,0.538842688278752,0.163461903113459,0,0,0.468642863667593,0.312160076830321,0.570471821544449,0.448346041655403,0.352303495931295,0.323745888736263,0.140450806702248,0,0.368502951935304,0.516628905878827,0,0,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0.226864366320042,0.358779271377724,0.427114777637135,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0.337552664482532,0.194874010322397,0.252433774244115,0.184099797284599,0.161646056818812,0,0,0,0,0.272746120590835,0.286804595389004,0.121973706129595,0,0.232387885739037,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,1.4763109092493,0,0,0,0,0.982827216677626,0,0.882926198829301,0,0,0,0,0,0,2.28065813717227,0,1.44331342025273,0.115930404975077,0,0,0.925971025153221,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0.148631162288728,0.93733833986777,0,0,0.268675568108545,0.290633938513962,0.383382679165211,0.492663237895943,0.704387472105808,4.56121854189699,6.05303804351238,5.55466707076072,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.699810938274399,1.2162378064119,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.224170287987055,0.788123040807709,7.33133754522359,3.46526197955321,0,0,1.54657762555539,0,0,7.49007023947182,17.9496875522415,0.828831026872071,0.36807447515742,0.500170521059677,0,1.03985430765404,0.535286966391485,0.473107245101804,0,0,2.27407504055985,1.03473071292505,0,0.368738337083406,0.260650843404249,0,0,0,5.1771408196468,2.56146138728266,0,0,0,0.496215615637554,0.306923946576125,0.280660094433074,0.768834895534206,0,0,0,0,0.177561725313127,0,0,0.348631135379878,0.241718899183244,0.200506470303285,1.10497186723076,0.459257792658427,0.910455840033585,0.393373244878272,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,14.2518919819857,9.93454713894622,0,0,0.650756789328606,0.309123034943167,0,0.165018999841176,0,0,0,0,0,0.15350367472613,0.275673144969061,0.107420244868274,0,0.170453254832202,0,0.991709492165869,0.960950336825531,0,1.0115778085555,1.39453664789186,0.94443704049192,0.6970372701606,0.308033580176089,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0,0,0,0.78494864019923,0.179872457583315,0,0.471249609382746,0,0,0.421258456238981,0.48763373908959,0.243713489631284,1.05650146756755,0,0.282810863907425,0,0.551365343546124,0,1.31535265576129,0,0,0.405820753925408,0.92947049429925,0,0.286822704408103,0,0.7133421029625,0,0.211107635297664,0,0,0.699869440489966,0.48111056362756,0.670302275535787,1.08890984861323,0.941438007767792,0,0,0,0.229723400206959,1.01489521846434,0,0.569647187174163,0.238231775457789,0,1.29694662238543,0,1.58625035258854,0,0,0.245040215981032,0,0,0,0,0,0,1.05836791361941,0,0,0,0,0,0.169291777801603,0,0,0,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| ||
|short_description=p@chr19:49377002..49377019,+ | |short_description=p@chr19:49377002..49377019,+ | ||
}} | }} |
Latest revision as of 15:53, 27 July 2015
Short description: | p@chr19:49377002..49377019, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49377002..49377019, + |
Coexpression cluster: | C621_Neutrophils_CD14_CD4_CD8_Natural_CD19_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.40e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.40e-51 | 42 |
myeloid leukocyte | 4.36e-46 | 72 |
defensive cell | 5.31e-46 | 48 |
phagocyte | 5.31e-46 | 48 |
myeloid lineage restricted progenitor cell | 3.66e-40 | 66 |
myeloid cell | 2.23e-39 | 108 |
common myeloid progenitor | 2.23e-39 | 108 |
granulocyte monocyte progenitor cell | 6.61e-39 | 67 |
macrophage dendritic cell progenitor | 6.16e-37 | 61 |
leukocyte | 6.72e-37 | 136 |
hematopoietic stem cell | 8.26e-35 | 168 |
monopoietic cell | 2.70e-34 | 59 |
monocyte | 2.70e-34 | 59 |
monoblast | 2.70e-34 | 59 |
promonocyte | 2.70e-34 | 59 |
hematopoietic cell | 3.68e-33 | 177 |
hematopoietic oligopotent progenitor cell | 4.99e-33 | 161 |
hematopoietic multipotent progenitor cell | 4.99e-33 | 161 |
hematopoietic lineage restricted progenitor cell | 1.76e-31 | 120 |
nongranular leukocyte | 6.43e-26 | 115 |
mesenchymal cell | 1.67e-15 | 354 |
connective tissue cell | 2.05e-15 | 361 |
motile cell | 3.05e-12 | 386 |
multi fate stem cell | 3.20e-11 | 427 |
granulocyte | 8.30e-11 | 8 |
somatic stem cell | 9.23e-11 | 433 |
stem cell | 1.12e-10 | 441 |
blood cell | 1.75e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.74e-33 | 76 |
bone element | 7.19e-31 | 82 |
hematopoietic system | 8.27e-31 | 98 |
blood island | 8.27e-31 | 98 |
skeletal element | 2.23e-28 | 90 |
hemolymphoid system | 1.33e-26 | 108 |
immune system | 2.23e-24 | 93 |
skeletal system | 3.39e-24 | 100 |
connective tissue | 2.11e-14 | 371 |
lateral plate mesoderm | 1.39e-13 | 203 |
musculoskeletal system | 1.87e-11 | 167 |