FFCP PHASE1:Hg19::chr19:49915463..49915468,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:49915463..49915468,+ | |||
|coexpression_cluster_id=C398 | |||
|description=CAGE_peak_at_chr19:49915463..49915468,+ | |||
|id=chr19:49915463..49915468,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.40e-14;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!5.03e-82!10;DOID:3095!9.92e-38!22;DOID:2994!9.92e-38!22;DOID:169!5.43e-23!6;DOID:3193!5.48e-18!2;DOID:962!5.48e-18!2;DOID:1192!1.85e-12!3 | |||
|ontology_enrichment_disease_v019=DOID:171;1.10e-59;10!DOID:3193;3.61e-34;2!DOID:962;3.61e-34;2!DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22!DOID:1192;2.62e-23;3!DOID:169;2.19e-12;6!DOID:3093;7.48e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.10e-59,10;DOID:3193,3.61e-34,2;DOID:962,3.61e-34,2;DOID:3095,7.08e-28,22;DOID:2994,7.08e-28,22;DOID:1192,2.62e-23,3;DOID:169,2.19e-12,6;DOID:3093,7.48e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0000013!2.38e-27!5;UBERON:0002410!2.38e-27!5;UBERON:0003714!5.48e-18!2;UBERON:0000010!1.05e-15!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.67e-66;4!UBERON:0000923;4.67e-66;4!UBERON:0010316;4.67e-66;4!UBERON:0005291;4.67e-66;4!UBERON:0002050;3.74e-53;5!UBERON:0005423;3.74e-53;5!UBERON:0003714;3.61e-34;2!UBERON:0000013;1.40e-14;5!UBERON:0002410;1.40e-14;5!UBERON:0000010;1.04e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,3.61e-34,2;UBERON:0000013,1.40e-14,5;UBERON:0002410,1.40e-14,5;UBERON:0000010,1.04e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874813840149763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,3.22491806912648,1.2754495206101,0.123935764259002,13.4074780313579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:49915463..49915468,+ | |||
}} |
Latest revision as of 16:03, 27 July 2015
Short description: | p@chr19:49915463..49915468, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49915463..49915468, + |
Coexpression cluster: | C398_neuroepithelioma_neuroectodermal_carcinoid_neuroblastoma_spinal_brain_synovial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 3.61e-34 | 2 |
sympathetic nervous system | 1.40e-14 | 5 |
autonomic nervous system | 1.40e-14 | 5 |
peripheral nervous system | 1.04e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.10e-59 | 10 |
peripheral nerve sheath neoplasm | 3.61e-34 | 2 |
neurofibroma | 3.61e-34 | 2 |
germ cell and embryonal cancer | 7.08e-28 | 22 |
germ cell cancer | 7.08e-28 | 22 |
peripheral nervous system neoplasm | 2.62e-23 | 3 |
neuroendocrine tumor | 2.19e-12 | 6 |
nervous system cancer | 7.48e-07 | 11 |