FFCP PHASE1:Hg19::chr19:51512580..51512608,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:51512580..51512608,- | |||
|coexpression_cluster_id=C449 | |coexpression_cluster_id=C449 | ||
|description=CAGE_peak_at_chr19:51512580..51512608,- | |description=CAGE_peak_at_chr19:51512580..51512608,- | ||
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|ontology_enrichment_celltype=CL:0001014!1.07e-13!2;CL:0001016!1.07e-13!2;CL:0002251!2.70e-11!21;CL:0002076!1.28e-09!43;CL:0000214!1.30e-09!3;CL:0002621!1.54e-09!3;CL:0002231!1.81e-09!3;CL:0000223!4.13e-07!59 | |ontology_enrichment_celltype=CL:0001014!1.07e-13!2;CL:0001016!1.07e-13!2;CL:0002251!2.70e-11!21;CL:0002076!1.28e-09!43;CL:0000214!1.30e-09!3;CL:0002621!1.54e-09!3;CL:0002231!1.81e-09!3;CL:0000223!4.13e-07!59 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!1.08e-16!14 | |ontology_enrichment_disease=DOID:1749!1.08e-16!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.43e-15;14 | |ontology_enrichment_disease_v019=DOID:1749;1.43e-15;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.43e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0001723!3.94e-34!3;UBERON:0001033!3.94e-34!3;UBERON:0010056!3.94e-34!3;UBERON:0000997!2.16e-26!1;UBERON:0005056!2.16e-26!1;UBERON:0003343!1.11e-25!4;UBERON:0004785!1.11e-25!4;UBERON:0003729!8.98e-21!5;UBERON:0000166!2.68e-19!21;UBERON:0000161!7.03e-18!35;UBERON:0000165!1.32e-14!28;UBERON:0000930!1.32e-14!28;UBERON:0001042!5.41e-11!10;UBERON:0009145!5.41e-11!10;UBERON:0000974!6.61e-11!10;UBERON:0006562!4.42e-10!11;UBERON:0006915!1.30e-09!3;UBERON:0002018!1.30e-09!3;UBERON:0002217!1.30e-09!3;UBERON:0007616!1.30e-09!3;UBERON:0001949!1.54e-09!3;UBERON:0000344!3.01e-09!12;UBERON:0001444!1.06e-08!48;UBERON:0008814!1.22e-07!15 | |ontology_enrichment_uberon=UBERON:0001723!3.94e-34!3;UBERON:0001033!3.94e-34!3;UBERON:0010056!3.94e-34!3;UBERON:0000997!2.16e-26!1;UBERON:0005056!2.16e-26!1;UBERON:0003343!1.11e-25!4;UBERON:0004785!1.11e-25!4;UBERON:0003729!8.98e-21!5;UBERON:0000166!2.68e-19!21;UBERON:0000161!7.03e-18!35;UBERON:0000165!1.32e-14!28;UBERON:0000930!1.32e-14!28;UBERON:0001042!5.41e-11!10;UBERON:0009145!5.41e-11!10;UBERON:0000974!6.61e-11!10;UBERON:0006562!4.42e-10!11;UBERON:0006915!1.30e-09!3;UBERON:0002018!1.30e-09!3;UBERON:0002217!1.30e-09!3;UBERON:0007616!1.30e-09!3;UBERON:0001949!1.54e-09!3;UBERON:0000344!3.01e-09!12;UBERON:0001444!1.06e-08!48;UBERON:0008814!1.22e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;5.42e-195;1!UBERON:0005056;5.42e-195;1!UBERON:0004176;5.42e-195;1!UBERON:0003134;4.53e-08;33!UBERON:0000474;2.32e-07;37 | |ontology_enrichment_uberon_v019=UBERON:0000997;5.42e-195;1!UBERON:0005056;5.42e-195;1!UBERON:0004176;5.42e-195;1!UBERON:0003134;4.53e-08;33!UBERON:0000474;2.32e-07;37 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,5.42e-195,1;UBERON:0005056,5.42e-195,1;UBERON:0004176,1.80e-10,22;UBERON:0003134,8.21e-07,37;UBERON:0000474,8.21e-07,37 | |||
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|short_description=p@chr19:51512580..51512608,- | |short_description=p@chr19:51512580..51512608,- | ||
}} | }} |
Latest revision as of 16:36, 27 July 2015
Short description: | p@chr19:51512580..51512608, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:51512580..51512608, - |
Coexpression cluster: | C449_epidermoid_anaplastic_occipital_oral_middle_Wilms_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 5.42e-195 | 1 |
external female genitalia | 5.42e-195 | 1 |
external genitalia | 1.80e-10 | 22 |
female reproductive organ | 8.21e-07 | 37 |
female reproductive system | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.43e-15 | 14 |