FFCP PHASE1:Hg19::chr19:51972656..51972681,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:51972656..51972681,- | |||
|coexpression_cluster_id=C975 | |coexpression_cluster_id=C975 | ||
|description=CAGE_peak_at_chr19:51972656..51972681,- | |description=CAGE_peak_at_chr19:51972656..51972681,- | ||
|id=chr19:51972656..51972681,- | |id=chr19:51972656..51972681,- | ||
|ontology_enrichment_celltype=CL:0002274!2.11e-28!5;CL:0000457!2.11e-28!5;CL:0002191!2.11e-28!5;CL:0000097!2.11e-28!5;CL:0000831!2.11e-28!5;CL:0002028!2.11e-28!5;CL:0000763!1.35e-18!112;CL:0000049!1.35e-18!112;CL:0002619!9.44e-17!3;CL:0000163!1.11e-15!9;CL:0002032!4.20e-11!165;CL:0000837!4.20e-11!165;CL:0000037!1.85e-10!172;CL:0000566!1.85e-10!172;CL:0000988!1.26e-09!182 | |ontology_enrichment_celltype=CL:0002274!2.11e-28!5;CL:0000457!2.11e-28!5;CL:0002191!2.11e-28!5;CL:0000097!2.11e-28!5;CL:0000831!2.11e-28!5;CL:0002028!2.11e-28!5;CL:0000763!1.35e-18!112;CL:0000049!1.35e-18!112;CL:0002619!9.44e-17!3;CL:0000163!1.11e-15!9;CL:0002032!4.20e-11!165;CL:0000837!4.20e-11!165;CL:0000037!1.85e-10!172;CL:0000566!1.85e-10!172;CL:0000988!1.26e-09!182 | ||
|ontology_enrichment_celltype_v019=CL:0000097;8.66e-49;5!CL:0002619;2.16e-28;3!CL:0000163;3.96e-27;9!CL:0000763;6.51e-15;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.50e-49,5;CL:0002028,7.50e-49,5;CL:0000763,4.38e-32,108;CL:0000049,4.38e-32,108;CL:0002619,2.88e-28,3;CL:0000163,3.66e-27,9;CL:0002032,1.10e-20,161;CL:0000837,1.10e-20,161;CL:0000037,1.04e-19,168;CL:0000988,1.43e-18,177;CL:0000839,3.48e-08,66;CL:0000557,4.75e-08,67;CL:0000134,8.11e-08,354;CL:0002320,1.32e-07,361;CL:0000766,1.98e-07,72;CL:0000219,7.39e-07,386 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.21e-10;1!CL:0000049;1.17e-09;108 | |||
|ontology_enrichment_disease=DOID:8692!1.81e-31!31;DOID:1240!2.16e-24!39;DOID:2531!6.11e-18!51;DOID:0060083!6.11e-18!51;DOID:1036!4.98e-17!8;DOID:8552!6.43e-07!1;DOID:9119!8.49e-07!1 | |ontology_enrichment_disease=DOID:8692!1.81e-31!31;DOID:1240!2.16e-24!39;DOID:2531!6.11e-18!51;DOID:0060083!6.11e-18!51;DOID:1036!4.98e-17!8;DOID:8552!6.43e-07!1;DOID:9119!8.49e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:8692;6.63e-40;31!DOID:1240;2.40e-26;39!DOID:1036;1.98e-19;8!DOID:2531;5.99e-16;51!DOID:0060083;5.99e-16;51!DOID:8552;4.80e-11;1!DOID:9119;1.21e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.43e-42,31;DOID:1240,5.07e-33,39;DOID:2531,7.83e-25,51;DOID:0060083,7.83e-25,51;DOID:1036,2.34e-19,8;DOID:8552,5.57e-11,1;DOID:9119,9.05e-11,1;DOID:0050686,5.41e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0005162!1.62e-11!2;UBERON:0000122!1.62e-11!2;UBERON:0002298!2.86e-10!8;UBERON:0001896!1.25e-07!3;UBERON:0005290!1.25e-07!3;UBERON:0010096!1.25e-07!3;UBERON:0000941!9.48e-07!1;UBERON:0004904!9.48e-07!1;UBERON:0002464!9.48e-07!1;UBERON:0001021!9.48e-07!1;UBERON:0001785!9.48e-07!1 | |ontology_enrichment_uberon=UBERON:0005162!1.62e-11!2;UBERON:0000122!1.62e-11!2;UBERON:0002298!2.86e-10!8;UBERON:0001896!1.25e-07!3;UBERON:0005290!1.25e-07!3;UBERON:0010096!1.25e-07!3;UBERON:0000941!9.48e-07!1;UBERON:0004904!9.48e-07!1;UBERON:0002464!9.48e-07!1;UBERON:0001021!9.48e-07!1;UBERON:0001785!9.48e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.21e-10;1!UBERON:0001785;1.21e-10;1!UBERON:0002464;1.21e-10;1!UBERON:0004904;1.21e-10;1!UBERON:0001021;1.21e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.10e-10,1;UBERON:0001785,1.10e-10,1;UBERON:0002464,1.10e-10,1;UBERON:0004904,1.10e-10,1;UBERON:0001021,1.10e-10,1;UBERON:0003902,1.10e-10,1;UBERON:0005425,1.10e-10,1;UBERON:0002384,2.57e-07,371;UBERON:0002371,5.42e-07,76 | |||
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|short_description=p@chr19:51972656..51972681,- | |short_description=p@chr19:51972656..51972681,- | ||
}} | }} |
Latest revision as of 16:43, 27 July 2015
Short description: | p@chr19:51972656..51972681, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:51972656..51972681, - |
Coexpression cluster: | C975_Mast_chronic_CD34_acute_leukemia_CD133_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.50e-49 | 5 |
basophil mast progenitor cell | 7.50e-49 | 5 |
myeloid cell | 4.38e-32 | 108 |
common myeloid progenitor | 4.38e-32 | 108 |
adult endothelial progenitor cell | 2.88e-28 | 3 |
endocrine cell | 3.66e-27 | 9 |
hematopoietic oligopotent progenitor cell | 1.10e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.10e-20 | 161 |
hematopoietic stem cell | 1.04e-19 | 168 |
hematopoietic cell | 1.43e-18 | 177 |
myeloid lineage restricted progenitor cell | 3.48e-08 | 66 |
granulocyte monocyte progenitor cell | 4.75e-08 | 67 |
mesenchymal cell | 8.11e-08 | 354 |
connective tissue cell | 1.32e-07 | 361 |
myeloid leukocyte | 1.98e-07 | 72 |
motile cell | 7.39e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.10e-10 | 1 |
cranial nerve | 1.10e-10 | 1 |
nerve trunk | 1.10e-10 | 1 |
nerve connecting eye with brain | 1.10e-10 | 1 |
nerve | 1.10e-10 | 1 |
retinal neural layer | 1.10e-10 | 1 |
presumptive neural retina | 1.10e-10 | 1 |
connective tissue | 2.57e-07 | 371 |
bone marrow | 5.42e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.43e-42 | 31 |
leukemia | 5.07e-33 | 39 |
hematologic cancer | 7.83e-25 | 51 |
immune system cancer | 7.83e-25 | 51 |
chronic leukemia | 2.34e-19 | 8 |
chronic myeloid leukemia | 5.57e-11 | 1 |
acute myeloid leukemia | 9.05e-11 | 1 |
organ system cancer | 5.41e-08 | 137 |