FFCP PHASE1:Hg19::chr19:6109227..6109241,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:6109227..6109241,+ | |||
|description=CAGE_peak_at_chr19:6109227..6109241,+ | |||
|id=chr19:6109227..6109241,+ | |||
|ontology_enrichment_celltype=CL:0002620!1.69e-08!23;CL:0000453!7.06e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.99e-15;5!CL:0000151;3.34e-13;36!CL:0002623;7.70e-12;3!CL:0000153;1.21e-08;9!CL:0000447;1.21e-08;9!CL:0000163;1.40e-08;9!CL:0000622;1.91e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.50e-15,5;CL:0002028,7.50e-15,5;CL:0000151,3.35e-13,36;CL:0002623,1.22e-11,3;CL:0000153,9.81e-09,9;CL:0000447,9.81e-09,9;CL:0000163,1.74e-08,9;CL:0000622,2.51e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.26e-09;1!UBERON:0004874;3.00e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;7.96e-10;1!DOID:4549;7.96e-10;1!DOID:5861;7.96e-10;1!DOID:6496;7.96e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.98e-10,1;DOID:4549,7.98e-10,1;DOID:5861,7.98e-10,1;DOID:6496,7.98e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.29e-13!115;UBERON:0004733!4.90e-07!12;UBERON:0002028!4.90e-07!12;UBERON:0007277!4.90e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;1.26e-09;1!UBERON:0006834;3.00e-09;1!UBERON:0000989;3.00e-09;1!UBERON:0002146;3.00e-09;1!UBERON:0008811;3.00e-09;1!UBERON:0005623;3.00e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,1.12e-09,1;UBERON:0007645,1.12e-09,1;UBERON:0007647,1.12e-09,1;UBERON:0010115,1.12e-09,1;UBERON:0002146,1.56e-09,1;UBERON:0005623,1.56e-09,1;UBERON:0006834,2.16e-09,1;UBERON:0000989,2.77e-09,1;UBERON:0008811,2.77e-09,1;UBERON:0006258,2.77e-09,1;UBERON:0005876,2.77e-09,1;UBERON:0004874,2.77e-09,1 | |||
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| ||
|short_description=p@chr19:6109227..6109241,+ | |||
}} | }} |
Latest revision as of 18:02, 27 July 2015
Short description: | p@chr19:6109227..6109241, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6109227..6109241, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.50e-15 | 5 |
basophil mast progenitor cell | 7.50e-15 | 5 |
secretory cell | 3.35e-13 | 36 |
acinar cell of salivary gland | 1.22e-11 | 3 |
GAG secreting cell | 9.81e-09 | 9 |
carbohydrate secreting cell | 9.81e-09 | 9 |
endocrine cell | 1.74e-08 | 9 |
acinar cell | 2.51e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dura mater | 1.12e-09 | 1 |
future meninx | 1.12e-09 | 1 |
ectomeninx | 1.12e-09 | 1 |
future dura mater | 1.12e-09 | 1 |
pulmonary valve | 1.56e-09 | 1 |
semi-lunar valve | 1.56e-09 | 1 |
uterus or analog | 2.16e-09 | 1 |
penis | 2.77e-09 | 1 |
intromittent organ | 2.77e-09 | 1 |
lateral plate mesenchyme | 2.77e-09 | 1 |
undifferentiated genital tubercle | 2.77e-09 | 1 |
somatopleure | 2.77e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.98e-10 | 1 |
extraosseous chondrosarcoma | 7.98e-10 | 1 |
myxoid chondrosarcoma | 7.98e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 7.98e-10 | 1 |