FFCP PHASE1:Hg19::chr1:109935515..109935518,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:109935515..109935518,- | |||
|description=CAGE_peak_at_chr1:109935515..109935518,- | |description=CAGE_peak_at_chr1:109935515..109935518,- | ||
|id=chr1:109935515..109935518,- | |id=chr1:109935515..109935518,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002195;1.18e-36;2!CL:0002571;1.18e-36;2!CL:0002561;1.57e-10;2 | |ontology_enrichment_celltype_v019=CL:0002195;1.18e-36;2!CL:0002571;1.18e-36;2!CL:0002561;1.57e-10;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002195,2.45e-36,2;CL:0002571,2.45e-36,2;CL:0002561,1.72e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.97e-19;1!UBERON:0004874;2.97e-19;1!UBERON:0006965;1.57e-10;2!UBERON:0003056;2.71e-07;3 | |ontology_enrichment_development_v019=UBERON:0005425;2.97e-19;1!UBERON:0004874;2.97e-19;1!UBERON:0006965;1.57e-10;2!UBERON:0003056;2.71e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.47e-30!115;UBERON:0001049!3.38e-16!57;UBERON:0005068!3.38e-16!57;UBERON:0006241!3.38e-16!57;UBERON:0007135!3.38e-16!57;UBERON:0002616!2.06e-15!59;UBERON:0000955!9.20e-13!69;UBERON:0006238!9.20e-13!69;UBERON:0002780!1.11e-12!41;UBERON:0001890!1.11e-12!41;UBERON:0006240!1.11e-12!41;UBERON:0003075!1.98e-12!86;UBERON:0007284!1.98e-12!86;UBERON:0005743!2.94e-12!86;UBERON:0001017!2.96e-12!82;UBERON:0003080!3.07e-12!42;UBERON:0001893!8.91e-12!34;UBERON:0002020!9.74e-12!34;UBERON:0003528!9.74e-12!34;UBERON:0002346!1.87e-11!90;UBERON:0000073!3.48e-11!94;UBERON:0001016!3.48e-11!94;UBERON:0002791!4.66e-11!33;UBERON:0001869!4.61e-10!32;UBERON:0002619!8.00e-10!22;UBERON:0000956!2.78e-08!25;UBERON:0000203!2.78e-08!25;UBERON:0003056!1.50e-07!61;UBERON:0001950!1.59e-07!20;UBERON:0000025!9.12e-07!194 | |ontology_enrichment_uberon=UBERON:0007023!1.47e-30!115;UBERON:0001049!3.38e-16!57;UBERON:0005068!3.38e-16!57;UBERON:0006241!3.38e-16!57;UBERON:0007135!3.38e-16!57;UBERON:0002616!2.06e-15!59;UBERON:0000955!9.20e-13!69;UBERON:0006238!9.20e-13!69;UBERON:0002780!1.11e-12!41;UBERON:0001890!1.11e-12!41;UBERON:0006240!1.11e-12!41;UBERON:0003075!1.98e-12!86;UBERON:0007284!1.98e-12!86;UBERON:0005743!2.94e-12!86;UBERON:0001017!2.96e-12!82;UBERON:0003080!3.07e-12!42;UBERON:0001893!8.91e-12!34;UBERON:0002020!9.74e-12!34;UBERON:0003528!9.74e-12!34;UBERON:0002346!1.87e-11!90;UBERON:0000073!3.48e-11!94;UBERON:0001016!3.48e-11!94;UBERON:0002791!4.66e-11!33;UBERON:0001869!4.61e-10!32;UBERON:0002619!8.00e-10!22;UBERON:0000956!2.78e-08!25;UBERON:0000203!2.78e-08!25;UBERON:0003056!1.50e-07!61;UBERON:0001950!1.59e-07!20;UBERON:0000025!9.12e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.08e-19;1!UBERON:0006518;1.08e-19;1!UBERON:0008949;1.08e-19;1!UBERON:0000101;1.08e-19;1!UBERON:0002167;1.08e-19;1!UBERON:0000989;2.97e-19;1!UBERON:0000941;2.97e-19;1!UBERON:0001785;2.97e-19;1!UBERON:0002464;2.97e-19;1!UBERON:0004904;2.97e-19;1!UBERON:0008811;2.97e-19;1!UBERON:0001021;2.97e-19;1!UBERON:0005933;1.57e-10;2!UBERON:0005942;1.57e-10;2!UBERON:0005932;1.57e-10;2!UBERON:0001954;2.60e-10;2!UBERON:0003714;2.60e-10;2!UBERON:0005162;2.60e-10;2!UBERON:0000122;2.60e-10;2!UBERON:0003022;2.60e-10;2!UBERON:0002421;2.60e-10;2!UBERON:0002600;2.60e-10;2 | |ontology_enrichment_uberon_v019=UBERON:0002171;1.08e-19;1!UBERON:0006518;1.08e-19;1!UBERON:0008949;1.08e-19;1!UBERON:0000101;1.08e-19;1!UBERON:0002167;1.08e-19;1!UBERON:0000989;2.97e-19;1!UBERON:0000941;2.97e-19;1!UBERON:0001785;2.97e-19;1!UBERON:0002464;2.97e-19;1!UBERON:0004904;2.97e-19;1!UBERON:0008811;2.97e-19;1!UBERON:0001021;2.97e-19;1!UBERON:0005933;1.57e-10;2!UBERON:0005942;1.57e-10;2!UBERON:0005932;1.57e-10;2!UBERON:0001954;2.60e-10;2!UBERON:0003714;2.60e-10;2!UBERON:0005162;2.60e-10;2!UBERON:0000122;2.60e-10;2!UBERON:0003022;2.60e-10;2!UBERON:0002421;2.60e-10;2!UBERON:0002600;2.60e-10;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,8.95e-20,1;UBERON:0006518,8.95e-20,1;UBERON:0008949,8.95e-20,1;UBERON:0000101,8.95e-20,1;UBERON:0002167,8.95e-20,1;UBERON:0000989,2.25e-19,1;UBERON:0008811,2.25e-19,1;UBERON:0006258,2.25e-19,1;UBERON:0005876,2.25e-19,1;UBERON:0004874,2.25e-19,1;UBERON:0000941,2.71e-19,1;UBERON:0001785,2.71e-19,1;UBERON:0002464,2.71e-19,1;UBERON:0004904,2.71e-19,1;UBERON:0001021,2.71e-19,1;UBERON:0003902,2.71e-19,1;UBERON:0005425,2.71e-19,1;UBERON:0005933,1.72e-10,2;UBERON:0005942,1.72e-10,2;UBERON:0005932,1.72e-10,2;UBERON:0001954,2.07e-10,2;UBERON:0003022,2.07e-10,2;UBERON:0002421,2.07e-10,2;UBERON:0002600,2.07e-10,2;UBERON:0003714,2.49e-10,2;UBERON:0005162,2.49e-10,2;UBERON:0000122,2.49e-10,2 | |||
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| ||
|short_description=p@chr1:109935515..109935518,- | |short_description=p@chr1:109935515..109935518,- | ||
}} | }} |
Latest revision as of 19:21, 27 July 2015
Short description: | p@chr1:109935515..109935518, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:109935515..109935518, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 2.45e-36 | 2 |
hepatic mesenchymal stem cell | 2.45e-36 | 2 |
outer root sheath cell | 1.72e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 8.95e-20 | 1 |
right lung lobe | 8.95e-20 | 1 |
lower lobe of lung | 8.95e-20 | 1 |
lobe of lung | 8.95e-20 | 1 |
right lung | 8.95e-20 | 1 |
penis | 2.25e-19 | 1 |
intromittent organ | 2.25e-19 | 1 |
lateral plate mesenchyme | 2.25e-19 | 1 |
undifferentiated genital tubercle | 2.25e-19 | 1 |
somatopleure | 2.25e-19 | 1 |
cranial nerve II | 2.71e-19 | 1 |
cranial nerve | 2.71e-19 | 1 |
nerve trunk | 2.71e-19 | 1 |
nerve connecting eye with brain | 2.71e-19 | 1 |
nerve | 2.71e-19 | 1 |
retinal neural layer | 2.71e-19 | 1 |
presumptive neural retina | 2.71e-19 | 1 |
hair root sheath | 1.72e-10 | 2 |
hair outer root sheath | 1.72e-10 | 2 |
bulb of hair follicle | 1.72e-10 | 2 |
Ammon's horn | 2.07e-10 | 2 |
lobe parts of cerebral cortex | 2.07e-10 | 2 |
hippocampal formation | 2.07e-10 | 2 |
limbic lobe | 2.07e-10 | 2 |
neural tissue | 2.49e-10 | 2 |
multi cell component structure | 2.49e-10 | 2 |
neuron projection bundle | 2.49e-10 | 2 |