FFCP PHASE1:Hg19::chr1:12679100..12679121,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:12679100..12679121,- | |||
|coexpression_cluster_id=C3854 | |coexpression_cluster_id=C3854 | ||
|description=CAGE_peak_at_chr1:12679100..12679121,- | |description=CAGE_peak_at_chr1:12679100..12679121,- | ||
Latest revision as of 20:31, 27 July 2015
| Short description: | p@chr1:12679100..12679121, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr1:12679100..12679121, - |
| Coexpression cluster: | C3854_anaplastic_Cardiac_Mesothelial_mesothelioma_mesenchymal_Smooth_squamous |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr1:12679100..12679121- |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| vascular associated smooth muscle cell | 6.92e-14 | 32 |
| smooth muscle cell | 3.20e-10 | 43 |
| smooth muscle myoblast | 3.20e-10 | 43 |
| muscle cell | 6.45e-10 | 55 |
| muscle precursor cell | 1.09e-08 | 58 |
| myoblast | 1.09e-08 | 58 |
| multi-potent skeletal muscle stem cell | 1.09e-08 | 58 |
| electrically responsive cell | 4.96e-08 | 61 |
| electrically active cell | 4.96e-08 | 61 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| epithelial tube | 1.79e-14 | 117 |
| artery | 1.79e-13 | 42 |
| arterial blood vessel | 1.79e-13 | 42 |
| arterial system | 1.79e-13 | 42 |
| systemic artery | 1.33e-12 | 33 |
| systemic arterial system | 1.33e-12 | 33 |
| trunk mesenchyme | 8.21e-12 | 122 |
| trunk | 1.18e-11 | 199 |
| mesenchyme | 1.52e-10 | 160 |
| entire embryonic mesenchyme | 1.52e-10 | 160 |
Showing 1 to 10 of 42 entries
