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FFCP PHASE1:Hg19::chr1:145727608..145727615,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=5174
|EntrezGene=entrezgene:5174
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=8821
|HGNC=HGNC:8821
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=Q5T2W1,B4DPB9,E7EU02
|UniProt=uniprot:Q5T2W1,uniprot:B4DPB9,uniprot:E7EU02
|association_with_transcript=-50bp_to_NM_001201325,NM_001201326,NM_002614_5end
|association_with_transcript=-50bp_to_NM_001201325,NM_001201326,NM_002614_5end
|cluster_id=chr1:145727608..145727615,+
|coexpression_cluster_id=C276
|coexpression_cluster_id=C276
|description=CAGE_peak_13_at_PDZK1_5end
|description=CAGE_peak_13_at_PDZK1_5end

Revision as of 20:52, 27 July 2015

Short description:p13@PDZK1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_13_at_PDZK1_5end
Coexpression cluster:C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal
Association with transcript: -50bp_to_NM_001201325, NM_001201326, NM_002614_5end
EntrezGene:5174
HGNC: 8821
UniProt: Q5T2W1B4DPB9E7EU02
Genome view:ZENBU


View on UCSC genome browser


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data