FFCP PHASE1:Hg19::chr1:145727608..145727615,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5174 | |EntrezGene=entrezgene:5174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=8821 | |HGNC=HGNC:8821 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q5T2W1,B4DPB9,E7EU02 | |UniProt=uniprot:Q5T2W1,uniprot:B4DPB9,uniprot:E7EU02 | ||
|association_with_transcript=-50bp_to_NM_001201325,NM_001201326,NM_002614_5end | |association_with_transcript=-50bp_to_NM_001201325,NM_001201326,NM_002614_5end | ||
|cluster_id=chr1:145727608..145727615,+ | |||
|coexpression_cluster_id=C276 | |coexpression_cluster_id=C276 | ||
|description=CAGE_peak_13_at_PDZK1_5end | |description=CAGE_peak_13_at_PDZK1_5end |
Revision as of 20:52, 27 July 2015
Short description: | p13@PDZK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PDZK1_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | -50bp_to_NM_001201325, NM_001201326, NM_002614_5end |
EntrezGene: | 5174 |
HGNC: | 8821 |
UniProt: | Q5T2W1B4DPB9E7EU02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p13@PDZK1 |
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0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.72e-27 | 6 |
rhombic lip | 2.72e-27 | 6 |
pineal body | 6.96e-21 | 2 |
regional part of epithalamus | 6.96e-21 | 2 |
secretory circumventricular organ | 6.96e-21 | 2 |
circumventricular organ | 6.96e-21 | 2 |
epithalamus | 6.96e-21 | 2 |
regional part of metencephalon | 1.35e-18 | 9 |
metencephalon | 1.35e-18 | 9 |
future metencephalon | 1.35e-18 | 9 |
Showing 1 to 10 of 27 entries