FFCP PHASE1:Hg19::chr1:154378546..154378548,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:154378546..154378548,+ | |||
|description=CAGE_peak_at_chr1:154378546..154378548,+ | |description=CAGE_peak_at_chr1:154378546..154378548,+ | ||
|id=chr1:154378546..154378548,+ | |id=chr1:154378546..154378548,+ | ||
|ontology_enrichment_celltype=CL:0002588!7.38e-08!2;CL:0002549!1.83e-07!2;CL:0000057!7.77e-07!75 | |ontology_enrichment_celltype=CL:0002588!7.38e-08!2;CL:0002549!1.83e-07!2;CL:0000057!7.77e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002588;1.91e-15;2!CL:0002541;9.43e-11;3!CL:0002580;9.43e-11;3!CL:0000306;2.18e-08;4!CL:0002222;2.18e-08;4!CL:0002224;2.18e-08;4 | |ontology_enrichment_celltype_v019=CL:0002588;1.91e-15;2!CL:0002541;9.43e-11;3!CL:0002580;9.43e-11;3!CL:0000306;2.18e-08;4!CL:0002222;2.18e-08;4!CL:0002224;2.18e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002588,2.37e-15,2;CL:0002580,7.42e-11,3;CL:0002541,8.99e-11,3;CL:0000306,1.96e-08,4;CL:0002222,1.96e-08,4;CL:0002224,1.96e-08,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003947!1.83e-07!2;UBERON:0005629!1.83e-07!2;UBERON:0005358!1.83e-07!2;UBERON:0001886!1.83e-07!2;UBERON:0004086!1.83e-07!2;UBERON:0005282!1.83e-07!2;UBERON:0005281!1.83e-07!2 | |ontology_enrichment_uberon=UBERON:0003947!1.83e-07!2;UBERON:0005629!1.83e-07!2;UBERON:0005358!1.83e-07!2;UBERON:0001886!1.83e-07!2;UBERON:0004086!1.83e-07!2;UBERON:0005282!1.83e-07!2;UBERON:0005281!1.83e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.43e-11;3!UBERON:0000920;9.43e-11;3!UBERON:0010077;2.18e-08;4!UBERON:0005389;2.18e-08;4!UBERON:0000484;2.18e-08;4!UBERON:0000965;2.18e-08;4!UBERON:0001803;2.18e-08;4!UBERON:0002066;5.86e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0003124;9.43e-11;3!UBERON:0000920;9.43e-11;3!UBERON:0010077;2.18e-08;4!UBERON:0005389;2.18e-08;4!UBERON:0000484;2.18e-08;4!UBERON:0000965;2.18e-08;4!UBERON:0001803;2.18e-08;4!UBERON:0002066;5.86e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.99e-11,3;UBERON:0010077,1.96e-08,4;UBERON:0005389,1.96e-08,4;UBERON:0000484,1.96e-08,4;UBERON:0002546,1.96e-08,4;UBERON:0000965,1.96e-08,4;UBERON:0001803,1.96e-08,4;UBERON:0003073,1.96e-08,4;UBERON:0005426,1.96e-08,4;UBERON:0002066,6.39e-07,5 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,2.19093027116212,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.843881661206331,0,0,0,0.323292113637624,1.06502877754984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,1.6437217193015,0,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0.473107245101804,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99500565274481,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573645408816206,1.17898849215745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,1.4655614944298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0.928067519756987,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0.865253124247578,0,0,0,0.101988829741982,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr1:154378546..154378548,+ | |short_description=p@chr1:154378546..154378548,+ | ||
}} | }} |
Latest revision as of 21:59, 27 July 2015
Short description: | p@chr1:154378546..154378548, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:154378546..154378548, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical vein | 2.37e-15 | 2 |
preadipocyte of the breast | 7.42e-11 | 3 |
chorionic membrane mesenchymal stem cell | 8.99e-11 | 3 |
crystallin accumulating cell | 1.96e-08 | 4 |
vertebrate lens cell | 1.96e-08 | 4 |
lens epithelial cell | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 8.99e-11 | 3 |
cuboidal epithelium | 1.96e-08 | 4 |
transparent eye structure | 1.96e-08 | 4 |
simple cuboidal epithelium | 1.96e-08 | 4 |
cranial placode | 1.96e-08 | 4 |
lens of camera-type eye | 1.96e-08 | 4 |
epithelium of lens | 1.96e-08 | 4 |
lens placode | 1.96e-08 | 4 |
lens vesicle | 1.96e-08 | 4 |
umbilical vein | 6.39e-07 | 5 |