FFCP PHASE1:Hg19::chr1:154981054..154981102,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:154981054..154981102,+ | |||
|coexpression_cluster_id=C3875 | |||
|description=CAGE_peak_at_chr1:154981054..154981102,+ | |||
|id=chr1:154981054..154981102,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.66e-39!76;CL:0002009!4.44e-37!65;CL:0000557!2.93e-36!71;CL:0000763!6.78e-36!112;CL:0000049!6.78e-36!112;CL:0002194!1.21e-35!63;CL:0000576!1.21e-35!63;CL:0000040!1.21e-35!63;CL:0000559!1.21e-35!63;CL:0000839!1.33e-32!70;CL:0002057!6.55e-30!42;CL:0000860!7.62e-29!45;CL:0000738!1.85e-25!140;CL:0000037!3.13e-25!172;CL:0000566!3.13e-25!172;CL:0002032!4.28e-24!165;CL:0000837!4.28e-24!165;CL:0000988!7.00e-22!182;CL:0002087!9.01e-21!119;CL:0002031!1.58e-19!124;CL:0002393!2.45e-09!9;CL:0002397!2.45e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;8.33e-31;48!CL:0000473;2.00e-26;39!CL:0000234;2.00e-26;39!CL:0000860;1.73e-25;33!CL:0002057;1.73e-25;33!CL:0000766;1.17e-23;69!CL:0000763;1.17e-12;100!CL:0002393;8.02e-10;6!CL:0002397;8.02e-10;6!CL:0000094;9.19e-09;8!CL:0002087;7.11e-08;104!CL:0000738;1.29e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.77e-55,72;CL:0002009,5.22e-55,61;CL:0002194,9.62e-53,59;CL:0000576,9.62e-53,59;CL:0000040,9.62e-53,59;CL:0000559,9.62e-53,59;CL:0000557,2.40e-50,67;CL:0000473,3.13e-46,48;CL:0000234,3.13e-46,48;CL:0000839,2.46e-45,66;CL:0000763,9.38e-45,108;CL:0000049,9.38e-45,108;CL:0000860,6.80e-41,42;CL:0002057,6.80e-41,42;CL:0000738,6.76e-30,136;CL:0000037,6.21e-28,168;CL:0002032,1.40e-26,161;CL:0000837,1.40e-26,161;CL:0002087,1.49e-26,115;CL:0000988,2.30e-25,177;CL:0002031,2.90e-23,120;CL:0002393,7.86e-14,9;CL:0002397,7.86e-14,9;CL:0000094,9.75e-09,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.59e-30;42!CL:0000049;4.86e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.23e-37!102;UBERON:0003061!9.23e-37!102;UBERON:0002193!5.20e-33!112;UBERON:0002371!2.93e-29!80;UBERON:0001474!1.82e-25!86;UBERON:0007023!2.52e-20!115;UBERON:0002405!4.82e-19!115;UBERON:0004765!9.09e-19!101;UBERON:0001434!9.09e-19!101;UBERON:0003081!2.61e-10!216;UBERON:0000178!2.10e-08!15;UBERON:0000179!2.10e-08!15;UBERON:0000463!2.10e-08!15;UBERON:0001737!9.49e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.24e-13;15!UBERON:0000179;2.24e-13;15!UBERON:0000463;2.24e-13;15!UBERON:0001044;4.97e-09;6!UBERON:0003293;4.97e-09;6!UBERON:0003294;4.97e-09;6!UBERON:0010047;4.97e-09;6!UBERON:0003408;4.97e-09;6!UBERON:0000167;4.97e-09;6!UBERON:0002390;6.09e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.37e-53,98;UBERON:0003061,6.37e-53,98;UBERON:0002193,8.65e-48,108;UBERON:0002371,2.95e-42,76;UBERON:0001474,7.36e-38,82;UBERON:0002405,1.09e-35,93;UBERON:0004765,6.35e-33,90;UBERON:0001434,6.84e-28,100;UBERON:0003081,1.25e-21,203;UBERON:0000178,2.55e-13,15;UBERON:0000179,2.55e-13,15;UBERON:0000463,2.55e-13,15;UBERON:0002204,5.52e-13,167;UBERON:0000926,2.53e-11,315;UBERON:0004120,2.53e-11,315;UBERON:0006603,2.53e-11,315;UBERON:0001044,4.57e-09,6;UBERON:0003293,4.57e-09,6;UBERON:0003294,4.57e-09,6;UBERON:0010047,4.57e-09,6;UBERON:0000167,4.57e-09,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,3.83829398097213,3.2511385896376,0,0.30120591877825,0.369754010166788,0,0,0,3.32397245119126,5.61524452916397,5.859293509328,4.47830948479849,3.56283032620878,3.60605794687861,19.3379657576821,9.44689859222024,14.555043671269,6.97287110717054,1.6446715520873,2.47765096716083,1.7261543539329,0.768482119587302,1.41889337933151,1.72372840368309,1.29096936716765,1.35426486594342,11.1062980330137,2.18324920046277,4.71919317334678,0.918251677112708,1.28371610830437,1.27867425159808,10.8850929061616,2.19410023383795,5.96714650745772,1.45104619314292,0,0.622822248995575,2.00998932205395,2.08593167368081,1.73751075764093,2.42159801053347,2.57794345191295,2.21523671208619,13.5203383239643,14.457092397623,6.49941801075965,20.8931253932481,18.7721116051883,18.4834424701642,4.84521664360123,9.34908382835724,5.84525292046829,0,0.546138611262131,0,1.28019066769952,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0.526768169550154,0,0.393010762749165,0.411202997999018,0.501559486172034,0.32592226663359,0,0,2.22820913770347,0,0.221533894583621,0,1.66518715643378,1.43065282315866,0.493313713811028,1.10540007114339,0.869409257205157,0.296573126324121,0,0,1.0197840842781,0,0,0,0,0,0,1.20460095262218,0.76791966692651,1.24930726552346,1.4206635122641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,2.18577172975525,4.07862887062872,1.62273696827342,2.61194605948901,2.12732736830184,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0,0,2.9576700009961,2.19160097101532,1.44606617930089,3.08823123650703,1.74303555273925,3.32178866755535,0.808987848960987,1.56977172100277,0.769494313892781,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0.402115889646523,0.277765335475589,0,0,0,0,0,0,0,0,0,0,7.38651018262192,3.7440682422278,7.8774516013026,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01354254859276,6.32501818449095,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.641715181398742,0,0,0,0,0,6.74106321552464,11.966458368161,10.3603878359009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20304078368662,5.60856922128404,4.58928498554811,1.5156378572313,0,3.93107381328584,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,1.38121483403844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0.330569830721956,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0.282431402330337,0,0,1.7737206141467,0.229723400206959,9.64150457541122,9.1756464857085,8.54470780761244,4.04994018278241,7.81588318863769,8.43015304550532,5.40031437238115,7.9312517629427,0.106824071127473,0,0,0,0,0,0,0.399158742865633,0.191505370132367,0,0,0,0,1.72347885350326,0,0,1.92705690124439,3.63239472943886,0.851692475380653,2.74804275804612,3.07240764308458,2.23676107892416,1.83534055883099,4.68931428964897,1.11362469558097,0,0,0.33307196799782,0,0,1.31857361344705,0,0,0,5.72986763370456,1.18785872333055,11.9792673818701,0,0.281338832821026,0,0,0,0.796991953004279,1.38141957765574,0,0,0,0,0,0.179021174675609,2.55786185113436,0.887790650732402,2.3948309234694,0,0,0.0927680981618513,0,0,0,2.89999830173917,0.1137934482855,0,0.472775363535873,0,0,0,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0,4.4664770042786,0,2.84715956464049,0,0,0,0,1.91400695839152,0,0.533034776018635,0,0.156980256395025,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,2.98578579323551,10.5264501758974,5.49927130440263,0,0,0,0.134802265961354,1.60515529459758,0,0,0,0,0,1.20990716048664,0.30607276163049,1.32691817219825,0,0,0,0,0,0,0,0,0,0.391969589657511,0,1.04836000945218,0,0,0.146178634172371,0.0821154570532092,12.8025501764714,0,0.90392296312213,0,0,0,0,0,0.85381197895741,0,0,0.114536596165916,0,0,0,0.942776138467182,0,0,0,0,0.600420288709789,1.09524303113594,1.27746588066972,0,0,0.279282401272254,0.229160424011684,0,0,0,0.89268582976749,0.335917362433631,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,1.1248694577575,8.51182150013745,0.0607495566580247,0,0.315222829196793,0.104909176269996,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.387848869084652,0.39669780522807,0,0,1.17466153824464,1.72924735609633,0.828478110694391,0.992332043623902,0,0,0,1.63205341010842,2.7575888342497,2.75711019087115,1.63936315354902,0,0,0.244052529803926,0.625954653532499,0.573409195690071,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.265729680626726,0.654261577023377,0,0,0,0.79994958341972,0.10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| |||
|short_description=p@chr1:154981054..154981102,+ | |||
}} |
Latest revision as of 22:09, 27 July 2015
Short description: | p@chr1:154981054..154981102, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:154981054..154981102, + |
Coexpression cluster: | C3875_CD14_Whole_CD14CD16_small_Neutrophils_Macrophage_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.77e-55 | 72 |
macrophage dendritic cell progenitor | 5.22e-55 | 61 |
monopoietic cell | 9.62e-53 | 59 |
monocyte | 9.62e-53 | 59 |
monoblast | 9.62e-53 | 59 |
promonocyte | 9.62e-53 | 59 |
granulocyte monocyte progenitor cell | 2.40e-50 | 67 |
defensive cell | 3.13e-46 | 48 |
phagocyte | 3.13e-46 | 48 |
myeloid lineage restricted progenitor cell | 2.46e-45 | 66 |
myeloid cell | 9.38e-45 | 108 |
common myeloid progenitor | 9.38e-45 | 108 |
classical monocyte | 6.80e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.80e-41 | 42 |
leukocyte | 6.76e-30 | 136 |
hematopoietic stem cell | 6.21e-28 | 168 |
hematopoietic oligopotent progenitor cell | 1.40e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.40e-26 | 161 |
nongranular leukocyte | 1.49e-26 | 115 |
hematopoietic cell | 2.30e-25 | 177 |
hematopoietic lineage restricted progenitor cell | 2.90e-23 | 120 |
intermediate monocyte | 7.86e-14 | 9 |
CD14-positive, CD16-positive monocyte | 7.86e-14 | 9 |
granulocyte | 9.75e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.37e-53 | 98 |
blood island | 6.37e-53 | 98 |
hemolymphoid system | 8.65e-48 | 108 |
bone marrow | 2.95e-42 | 76 |
bone element | 7.36e-38 | 82 |
immune system | 1.09e-35 | 93 |
skeletal element | 6.35e-33 | 90 |
skeletal system | 6.84e-28 | 100 |
lateral plate mesoderm | 1.25e-21 | 203 |
blood | 2.55e-13 | 15 |
haemolymphatic fluid | 2.55e-13 | 15 |
organism substance | 2.55e-13 | 15 |
musculoskeletal system | 5.52e-13 | 167 |
mesoderm | 2.53e-11 | 315 |
mesoderm-derived structure | 2.53e-11 | 315 |
presumptive mesoderm | 2.53e-11 | 315 |
saliva-secreting gland | 4.57e-09 | 6 |
gland of oral region | 4.57e-09 | 6 |
gland of foregut | 4.57e-09 | 6 |
oral gland | 4.57e-09 | 6 |
oral cavity | 4.57e-09 | 6 |