FFCP PHASE1:Hg19::chr1:156084331..156084350,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:156084331..156084350,- | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_at_chr1:156084331..156084350,- | |description=CAGE_peak_at_chr1:156084331..156084350,- | ||
|id=chr1:156084331..156084350,- | |id=chr1:156084331..156084350,- | ||
|ontology_enrichment_celltype=CL:0000097;4.98e-13;5!CL:0002393;3.71e-10;6!CL:0002397;3.71e-10;6!CL:0000767;1.78e-09;3!CL:0000623;1.78e-09;3!CL:0000228;4.06e-08;1!CL:0002372;4.06e-08;1!CL:0002032;1.00e-07;1!CL:0000557;1.00e-07;1!CL:0002591;1.00e-07;1!CL:0000163;1.96e-07;9 | |ontology_enrichment_celltype=CL:0000012!4.86e-12!682;CL:0000548!8.59e-12!679;CL:0000004!8.59e-12!679;CL:0000255!8.59e-12!679;CL:0000063!9.93e-12!578;CL:0000860!1.00e-11!45;CL:0000557!1.69e-11!71;CL:0000738!1.14e-10!140;CL:0002057!3.80e-10!42;CL:0000144!5.91e-10!625;CL:0000766!6.11e-10!76;CL:0002371!9.44e-10!591;CL:0000003!1.06e-09!722;CL:0002031!1.17e-09!124;CL:0000839!4.02e-09!70;CL:0000037!2.68e-08!172;CL:0000566!2.68e-08!172;CL:0002009!3.74e-08!65;CL:0002320!4.70e-08!365;CL:0002032!6.30e-08!165;CL:0000837!6.30e-08!165;CL:0000134!8.02e-08!358;CL:0000988!1.58e-07!182;CL:0000763!1.61e-07!112;CL:0000049!1.61e-07!112;CL:0002087!1.82e-07!119;CL:0000219!3.00e-07!390;CL:0002194!4.00e-07!63;CL:0000576!4.00e-07!63;CL:0000040!4.00e-07!63;CL:0000559!4.00e-07!63 | ||
| | |ontology_enrichment_celltype_v019=CL:0000097;4.98e-13;5!CL:0002393;3.71e-10;6!CL:0002397;3.71e-10;6!CL:0000767;1.78e-09;3!CL:0000623;1.78e-09;3!CL:0000228;4.06e-08;1!CL:0002372;4.06e-08;1!CL:0002032;1.00e-07;1!CL:0000557;1.00e-07;1!CL:0002591;1.00e-07;1!CL:0000163;1.96e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.00e-13,5;CL:0002028,5.00e-13,5;CL:0000738,1.10e-11,136;CL:0002032,1.39e-10,161;CL:0000837,1.39e-10,161;CL:0002031,1.72e-10,120;CL:0000037,5.50e-10,168;CL:0000767,1.21e-09,3;CL:0000557,1.49e-09,67;CL:0000988,2.73e-09,177;CL:0000623,3.10e-09,3;CL:0000825,3.10e-09,3;CL:0000766,8.22e-09,72;CL:0000228,3.55e-08,1;CL:0002372,3.55e-08,1;CL:0000763,1.48e-07,108;CL:0000049,1.48e-07,108;CL:0002591,1.54e-07,1;CL:0000163,1.97e-07,9;CL:0002393,4.41e-07,9;CL:0002397,4.41e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.06e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.66e-11!86;UBERON:0002371!1.12e-10!80;UBERON:0004765!1.76e-10!101;UBERON:0001434!1.76e-10!101;UBERON:0002384!2.43e-07!375;UBERON:0002390!2.94e-07!102;UBERON:0003061!2.94e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.28e-08,76;UBERON:0001474,1.77e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0.0821005894499457,0.0787107813136792,1.57345710739562,0.767658796194425,1.70297735647684,1.83884244895785,0.6024118375565,0.369754010166788,0,0,0.293600439334847,1.66198622559563,1.60435557976113,1.73608696572681,0,0,0,0.581592955118259,0.755751887377619,0,0.697287110717054,0.822335776043652,0.929119112685311,0,0,0.945928919554341,0.344745680736619,1.29096936716765,0,0.376484679085209,0,0.449446968890169,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0.598390972864896,0,0.580418477257168,0,0.622822248995575,0,0.521482918420201,1.08594422352558,0,1.10483290796269,0.632924774881769,0.422510572623884,0,0.419317291016752,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0.983548850569165,2.35806457649499,0.411202997999018,0,0,0,0,0,0.589211814949674,0.221533894583621,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0.68725489096526,0,0,0,0,0,0,0,0,0,2.01606743224732,1.60464117470104,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0,0,0,0.132957960518865,0,0,0,0.39752481473341,1.72046919021225,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0.23486899728753,0,0,0,0.245668634623536,0.206651562351531,0,0,0.910161361938026,0,0,0,0,0,0,0,0,1.4351170855109,0,0.211931901159562,0.300091096084402,0.206105058476878,0.257640540045629,0.37223371266318,0.337552664482532,0,0.252433774244115,0.184099797284599,0.161646056818812,0.355009592516614,0.201504196455281,0.339121184620975,0.386521706326594,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0.435758888184812,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0,0,1.03993478527958,0,0,0,0,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0.16798212819886,0,0,0.581267877027924,1.91691339582606,0.492663237895943,0.264145302039678,10.9883901236609,13.2590357143605,9.84690980725764,0,0.381988425558278,0,3.4214489204541,0.102827492703324,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,2.85273810081437,0,0.410952645100767,0.358121926479791,0,0.788123040807709,1.07813787429759,1.28343036279748,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.535286966391485,0.157702415033935,0,0,0,0,0,0,0.260650843404249,0,0,0,0.862856803274467,0.426910231213777,0,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.671624264166535,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0.192190067365106,0,0.30347334256665,0,0,0,0,0,0.869932992075073,0,0,0,0.316379424718726,0,0,0,0.636406495851874,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0,0,0.329294892959902,0.75894634753143,0.349934720244983,0,0,2.17781969722645,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586164286206121,0.278406173895242,0,0,0,0,0.37428108081644,0,0,0.222886768554957,0,0.23874448473769,0,0,0,0,0,0.824019371133798,0,0,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0,0,0.293977192243133,0.0870592065804026,0,0,0.387025325156341,0.365446585430928,0.328461828212837,0,0,0,0,0.397429223405979,0,0.195551382734803,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0.674921674654501,1.5476039091159,0,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0.235265819698172,0,0,0,0.467426619694449,0,0.189403005275089,0.251567901752575,0,0.915360273587694,0.151230923763239,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0.414706207840855,0.265841714557995,0,0.300515217994437,0.761610424337591,0,0.181848659202559,0.107410557042488,0,0,0,0.686791410365586,0,0,0,0,0,0.453411851024545,0.231522474323834,0,0.179088841081487,0.308801447160972,0.438568099157414,0.176689145945881,0.38582807654183,0,0.256241518587947,0,0,0,0.194860308839388,0.265729680626726,0,0,0,0.422624246717254,0.19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| ||
|short_description=p@chr1:156084331..156084350,- | |short_description=p@chr1:156084331..156084350,- | ||
}} | }} |
Latest revision as of 22:29, 27 July 2015
Short description: | p@chr1:156084331..156084350, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:156084331..156084350, - |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.00e-13 | 5 |
basophil mast progenitor cell | 5.00e-13 | 5 |
leukocyte | 1.10e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.39e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.39e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 1.72e-10 | 120 |
hematopoietic stem cell | 5.50e-10 | 168 |
basophil | 1.21e-09 | 3 |
granulocyte monocyte progenitor cell | 1.49e-09 | 67 |
hematopoietic cell | 2.73e-09 | 177 |
natural killer cell | 3.10e-09 | 3 |
pro-NK cell | 3.10e-09 | 3 |
myeloid leukocyte | 8.22e-09 | 72 |
multinucleate cell | 3.55e-08 | 1 |
myotube | 3.55e-08 | 1 |
myeloid cell | 1.48e-07 | 108 |
common myeloid progenitor | 1.48e-07 | 108 |
smooth muscle cell of the pulmonary artery | 1.54e-07 | 1 |
endocrine cell | 1.97e-07 | 9 |
intermediate monocyte | 4.41e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.41e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.28e-08 | 76 |
bone element | 1.77e-07 | 82 |