FFCP PHASE1:Hg19::chr1:156640973..156641008,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:156640973..156641008,+ to FFCP PHASE1:Hg19::chr1:156640973..156641008,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:156640973..156641008,+ | |||
|description=CAGE_peak_at_chr1:156640973..156641008,+ | |||
|id=chr1:156640973..156641008,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.91e-15!180;CL:0000133!2.06e-12!59;CL:0000221!2.85e-09!71;CL:0002321!1.28e-08!248;CL:0000220!2.01e-08!246;CL:0000115!5.52e-08!35;CL:0002319!1.17e-07!25;CL:0000540!1.91e-07!6;CL:0000031!1.91e-07!6;CL:0000404!1.91e-07!6;CL:0002139!2.89e-07!24;CL:0000071!3.15e-07!18;CL:0002546!3.15e-07!18;CL:0000047!5.97e-07!8;CL:0000393!6.33e-07!60;CL:0000211!6.33e-07!60;CL:0000333!9.54e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0002262;3.89e-13;2!CL:1000398;3.89e-13;2!CL:0000188;8.23e-11;9!CL:1000413;1.12e-10;9!CL:0000540;1.83e-09;6!CL:0000404;1.83e-09;6!CL:0000115;3.90e-09;36!CL:0002591;4.74e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,3.46e-13,2;CL:1000398,3.46e-13,2;CL:1000413,7.44e-11,9;CL:0000188,9.62e-11,9;CL:0000393,1.15e-09,61;CL:0000211,1.15e-09,61;CL:0000115,1.26e-09,36;CL:0000540,1.63e-09,6;CL:0000031,1.63e-09,6;CL:0000404,1.63e-09,6;CL:0000222,2.72e-09,121;CL:0002078,1.84e-07,45;CL:0000047,3.04e-07,8;CL:0002591,6.20e-07,1;CL:0002321,6.71e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000031;1.83e-09;6!UBERON:0010227;2.09e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!8.37e-12!312;UBERON:0000483!3.09e-11!309;UBERON:0000490!3.75e-09!138;UBERON:0004872!4.34e-09!84;UBERON:0003914!1.68e-08!118;UBERON:0002049!1.70e-08!79;UBERON:0007798!1.70e-08!79;UBERON:0001009!3.48e-08!113;UBERON:0004535!3.98e-08!110;UBERON:0000055!7.23e-08!69;UBERON:0000477!1.38e-07!286;UBERON:0001981!1.94e-07!60;UBERON:0007500!1.94e-07!60;UBERON:0004537!1.94e-07!60;UBERON:0006965!1.94e-07!60;UBERON:0001986!3.15e-07!18;UBERON:0004638!3.15e-07!18;UBERON:0004852!3.15e-07!18;UBERON:0000025!3.97e-07!194;UBERON:0004111!5.42e-07!241;UBERON:0000480!7.94e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;3.89e-13;2!UBERON:0003497;3.89e-13;2!UBERON:0003909;3.89e-13;2!UBERON:0003835;3.89e-13;2!UBERON:0003915;1.12e-10;9!UBERON:0004700;1.12e-10;9!UBERON:0001917;1.12e-10;9!UBERON:0001134;3.55e-09;16!UBERON:0002036;3.55e-09;16!UBERON:0001280;4.79e-09;3!UBERON:0004647;4.79e-09;3!UBERON:0002385;2.05e-08;31!UBERON:0001015;2.05e-08;31!UBERON:0000383;2.05e-08;31!UBERON:0002079;2.09e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,3.46e-13,2;UBERON:0003497,3.46e-13,2;UBERON:0003909,3.46e-13,2;UBERON:0003835,3.46e-13,2;UBERON:0003915,7.44e-11,9;UBERON:0004700,7.44e-11,9;UBERON:0001917,7.44e-11,9;UBERON:0001280,4.42e-09,3;UBERON:0004647,4.42e-09,3;UBERON:0005171,4.42e-09,3;UBERON:0002079,1.54e-07,1;UBERON:0007503,3.22e-07,78;UBERON:0003914,3.36e-07,117;UBERON:0000490,6.06e-07,148;UBERON:0005256,9.36e-07,122;UBERON:0000353,9.54e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0.331397375727916,1.34465029290355,0.602694528023977,2.19093027116212,0.487932798790507,0.123121058076788,0.204000691244253,0.313454721478088,3.14859585844162,0.958120975510189,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0.12786256184353,0,0,0,0,0,0.472674085820339,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0.39752481473341,1.72046919021225,0.347140501607594,0,2.51699661725944,2.75118041940067,0.417989933073621,0,0,0,0.805658634218294,0,0.488124115096339,1.47065232138347,0,0.0892997282840798,0.22452937262617,0.450445921933289,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0.132409180813219,0.573673241497627,0,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0.352303495931295,0.647491777472526,0.421352420106746,0,0.61417158655884,0,0,0,0,0,1.0100166837244,0.375355559615893,0,0,0,0,0.453728732640084,0.89694817844431,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0.515281080091258,0,0,0,0.504867548488229,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.508681776931463,0,0,0,0.487894824518382,0,0.464775771478074,0.310983165046111,0.756962552626885,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,2.21446636387394,2.80483547606892,0.4115740113314,1.47008711385542,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,3.11980435583874,0,0.927443239800615,0.117408694235822,0.433099343283221,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0.763976851116555,0,0,0.308482478109971,0.901029173531752,0,0.336393253036082,0,0.51336800074665,0,0,0.845302752556,0.797814349754612,0,0.257207374262142,1.41849132023278,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0.821905290201534,0.179060963239896,0,0,0,0,0.508189248444927,0,1.54657762555539,0.670065061337395,5.74144876487847,0,0,0,0,0,0,0.415941723061614,1.24900292158013,0.315404830067869,0,0,0,0,0,0,0.781952530212746,0.195801157462741,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925258162815933,0.177561725313127,0.246381468041427,0.519254429183621,0.581051892299796,0.120859449591622,0,0,0.114814448164607,0.546273504020151,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0.422206515571503,3.4120015221269,3.2317804002538,0.431831832204279,0,0,0,0,0,0.447749509444357,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,2.03008508413456,0.154048617114644,1.07452572308291,1.51620229732984,0.107420244868274,0.580066775656914,0.340906509664404,7.74578710126615,0,0,0,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.545999645631943,0.282810863907425,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0.845086807596724,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0.432164393964449,0,0,0.271808412147228,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.798716001995964,0,0,0.201550417460179,0.360299883542404,0,0,0.0824158583811665,0,0,0,0,0.136203406111576,0.803765742325096,0.550157746388935,1.24632101408756,0,0,0.121499113316049,0,0.157611414598396,0.0524545881349981,0,0,0,2.85878130549347,0.662091970365432,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0.592834895693833,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.124192805882767,0.138348634936231,0,0.303298235083296,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0.318593534327405,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,2.40016658797892,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0.327628914576042,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,2.34323429584154,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.197318320688547,0,0.333694205676207,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0.647428837187895,0,2.3196288626764,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,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| ||
|short_description=p@chr1:156640973..156641008,+ | |||
}} | }} |
Latest revision as of 22:41, 27 July 2015
Short description: | p@chr1:156640973..156641008, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:156640973..156641008, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 3.46e-13 | 2 |
endothelial cell of hepatic sinusoid | 3.46e-13 | 2 |
endothelial cell of artery | 7.44e-11 | 9 |
cell of skeletal muscle | 9.62e-11 | 9 |
electrically responsive cell | 1.15e-09 | 61 |
electrically active cell | 1.15e-09 | 61 |
endothelial cell | 1.26e-09 | 36 |
neuron | 1.63e-09 | 6 |
neuroblast | 1.63e-09 | 6 |
electrically signaling cell | 1.63e-09 | 6 |
mesodermal cell | 2.72e-09 | 121 |
meso-epithelial cell | 1.84e-07 | 45 |
neuronal stem cell | 3.04e-07 | 8 |
smooth muscle cell of the pulmonary artery | 6.20e-07 | 1 |
embryonic cell | 6.71e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 3.46e-13 | 2 |
abdomen blood vessel | 3.46e-13 | 2 |
sinusoid | 3.46e-13 | 2 |
abdominal segment blood vessel | 3.46e-13 | 2 |
endothelial tube | 7.44e-11 | 9 |
arterial system endothelium | 7.44e-11 | 9 |
endothelium of artery | 7.44e-11 | 9 |
liver parenchyma | 4.42e-09 | 3 |
liver lobule | 4.42e-09 | 3 |
hepatic duct | 4.42e-09 | 3 |
left cardiac atrium | 1.54e-07 | 1 |
epithelial vesicle | 3.22e-07 | 78 |
epithelial tube | 3.36e-07 | 117 |
unilaminar epithelium | 6.06e-07 | 148 |
trunk mesenchyme | 9.36e-07 | 122 |
parenchyma | 9.54e-07 | 15 |