FFCP PHASE1:Hg19::chr1:160259912..160259932,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:160259912..160259932,- to FFCP PHASE1:Hg19::chr1:160259912..160259932,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:160259912..160259932,- | |||
|description=CAGE_peak_at_chr1:160259912..160259932,- | |||
|id=chr1:160259912..160259932,- | |||
|ontology_enrichment_celltype=CL:0000055!4.80e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:1000487;2.14e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,1.37e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.07e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;9.36e-12;3!DOID:127;9.36e-12;3!DOID:0060072;6.28e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.41e-12,3;DOID:127,6.41e-12,3;DOID:0060072,4.75e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.51e-07!45;UBERON:0002416!1.51e-07!45;UBERON:0003102!7.86e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0003937;7.67e-08;12!UBERON:0005399;7.67e-08;12!UBERON:0002072;7.87e-08;5!UBERON:0003101;1.44e-07;22!UBERON:0000079;1.44e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,8.13e-08,5;UBERON:0003937,9.31e-08,12;UBERON:0005399,9.31e-08,12;UBERON:0003101,1.59e-07,22;UBERON:0000079,1.59e-07,22 | |||
|phase1_expression=0.908391896352783,0.214100523890983,0.281908808191942,1.0007329835313,0,0.872338524100369,5.06599756336621,3.15859936713415,0.522371256399677,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,1.34465029290355,0,0,0.975865597581014,0,0.408001382488506,0,0,0.273748850145768,0.376627918784408,0.229240217243854,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0.284338464974843,0,0,0.200544447470142,0,0,0.32389366601898,0,0.872389432677388,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0,0.645484683583826,1.35426486594342,1.12945403725563,0.545812300115692,0,0.918251677112708,0.320929027076094,1.27867425159808,0.329851300186716,0,0,0,0,0,0.502497330513487,0.521482918420201,0,1.21079900526674,0,0,0,0,0,0.336985893439485,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.384273959177026,0.130059347559878,0,0.552700035571697,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,2.43806866313962,0.670700859703636,0,0.722878304769133,0.50133791063589,0.289693037921647,0,0,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0,0.258416759169329,0,0.33472061276467,0.805658634218294,0,0.488124115096339,0,0.81014194788176,0.267899184852239,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0.633152558322899,0.397227542439656,1.14734648299525,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0.936480230490962,0,1.04614076386261,0,0,0,0.408308342509787,0.491337269247072,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0.30648779579902,0.150238058906597,0.113432183160021,0.538168907066586,0.213557388818567,0.211931901159562,1.20036438433761,0.206105058476878,0.772921620136887,0.558350568994769,0.506328996723799,0.194874010322397,0.504867548488229,0,0.323292113637624,0,0.403008392910561,0.339121184620975,0,0.272746120590835,0,0.487894824518382,0,0.464775771478074,0.310983165046111,0.504641701751257,0,0,1.92972281457866,1.38134921352481,0.464367928031979,0,0.473227200159376,0.337169380156203,0,0.330881918197182,0.435758888184812,0.474541238222193,0.134831308160164,0.392442930250692,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0,0.439001141634502,0,0.201057944823262,0.185176890317059,0,0,1.44331342025273,0.231860809950154,0.117408694235822,0.144366447761074,0,0.761016608938393,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0.179117045405697,0.290633938513962,0,0,0.352193736052904,0,0.432359860250884,0.12624243342638,0.063497894292169,1.14596527667483,0,1.71072446022705,0.411309970813294,0,0,0.112131084345361,0,0.2933531432838,0.387815147273333,0,0.845302752556,0.26593811658487,1.04007436911366,0,0,0.266422179016099,0.57191197463259,0,0,0,0,0,0.301439377059586,0,0.199945982364114,1.2162378064119,0,2.10833939483032,0.479249710983165,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0.112085143993527,0,0,0.128343036279748,2.28685161800217,0,0,0.167516265334349,0,2.24702107184155,0,0,0,0,0.271265023699736,0.623912584592421,0.713715955188647,0.473107245101804,0.117141414992713,0,0,1.03473071292505,0,0,0.434418072340414,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0.744323423456331,0.153461973288062,0.561320188866147,0.384417447767103,0,0.321707842287215,0,0.462629081407967,1.24293207719189,0.98552587216571,1.55776328755086,0.697262270759755,0.966875596732978,1.00253235151642,0.552485933615378,0,0.182091168006717,2.22911505431021,0,0,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0,0,0.650756789328606,0.309123034943167,0.183138929636687,0.165018999841176,0,1.30012049207304,0,1.25671933779759,0.462145851343933,0.307007349452259,0.275673144969061,0.214840489736547,0.145016693914229,0.170453254832202,0.801288320820636,0.991709492165869,0,0,0.10115778085555,2.32422774648643,0.62962469366128,0.6970372701606,0.308033580176089,0.532306030317022,0,0,0,0.372158369359667,0,0.571890581771475,0,0,0,0,0.539617372749944,0.823611089208164,0.471249609382746,0.404364963146632,0,0,0,0.243713489631284,1.05650146756755,1.22849920267187,1.55545975149084,0,0,2.65375590096488,0,0,0.655894752046633,0.202910376962704,0,0,0.286822704408103,0.0982490410131212,0,0,0.633322905892992,0,0,0,0.192444225451024,0.670302275535787,0,0.376575203107117,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0,0,0,0,0.371606350251437,0,0,0,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0.140669416410513,0.667852230137435,0.16480387422676,0,0,0,0.251932747854276,0.102268682502155,0.246169610922139,0.933118762985422,0.0898683511473268,0.35804234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| ||
|short_description=p@chr1:160259912..160259932,- | |||
}} | }} |
Latest revision as of 23:19, 27 July 2015
Short description: | p@chr1:160259912..160259932, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:160259912..160259932, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 1.37e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
hypodermis | 8.13e-08 | 5 |
sex gland | 9.31e-08 | 12 |
male reproductive gland | 9.31e-08 | 12 |
male organism | 1.59e-07 | 22 |
male reproductive system | 1.59e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.41e-12 | 3 |
leiomyoma | 6.41e-12 | 3 |
benign neoplasm | 4.75e-09 | 4 |