FFCP PHASE1:Hg19::chr1:183213177..183213210,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:183213177..183213210,+ | |||
|coexpression_cluster_id=C362 | |||
|description=CAGE_peak_at_chr1:183213177..183213210,+ | |description=CAGE_peak_at_chr1:183213177..183213210,+ | ||
|id=chr1:183213177..183213210,+ | |id=chr1:183213177..183213210,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.02e-32!43;CL:0000066!2.04e-31!254;CL:0000223!8.78e-23!59;CL:0002368!2.03e-20!13;CL:0002251!2.72e-14!21;CL:0002159!3.14e-14!13;CL:0002202!5.35e-13!9;CL:0002632!5.35e-13!9;CL:0000220!3.12e-10!246;CL:0002321!4.93e-10!248;CL:0000076!3.33e-09!62;CL:0002077!1.33e-08!33;CL:0000063!1.49e-08!578;CL:0002621!2.29e-07!3;CL:0002166!2.54e-07!3;CL:0002328!7.48e-07!3;CL:0000548!7.99e-07!679;CL:0000004!7.99e-07!679;CL:0000255!7.99e-07!679;CL:0000068!8.39e-07!3;CL:0000069!8.39e-07!3;CL:0000307!8.39e-07!3;CL:0000377!8.39e-07!3 | |ontology_enrichment_celltype=CL:0002076!1.02e-32!43;CL:0000066!2.04e-31!254;CL:0000223!8.78e-23!59;CL:0002368!2.03e-20!13;CL:0002251!2.72e-14!21;CL:0002159!3.14e-14!13;CL:0002202!5.35e-13!9;CL:0002632!5.35e-13!9;CL:0000220!3.12e-10!246;CL:0002321!4.93e-10!248;CL:0000076!3.33e-09!62;CL:0002077!1.33e-08!33;CL:0000063!1.49e-08!578;CL:0002621!2.29e-07!3;CL:0002166!2.54e-07!3;CL:0002328!7.48e-07!3;CL:0000548!7.99e-07!679;CL:0000004!7.99e-07!679;CL:0000255!7.99e-07!679;CL:0000068!8.39e-07!3;CL:0000069!8.39e-07!3;CL:0000307!8.39e-07!3;CL:0000377!8.39e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.54e-29;13!CL:0002076;1.68e-29;42!CL:0002159;8.70e-22;14!CL:0002621;2.30e-16;3!CL:0002166;2.81e-16;3!CL:0002328;1.02e-14;3!CL:0000362;1.51e-13;9!CL:0000240;2.23e-13;6!CL:0000311;2.23e-13;6!CL:0000079;2.23e-13;6!CL:0000237;2.23e-13;6!CL:0002202;3.12e-13;9!CL:0002632;3.12e-13;9!CL:0000244;5.68e-12;4!CL:0000731;5.68e-12;4!CL:0002251;3.52e-11;20!CL:0002077;5.00e-11;34!CL:0000317;1.25e-10;2!CL:1000448;1.25e-10;2!CL:0002308;1.25e-10;2!CL:0002140;1.25e-10;2!CL:0000312;1.34e-09;5!CL:0000622;3.54e-09;5!CL:0002231;6.90e-08;3!CL:0000154;1.01e-07;6!CL:0000307;1.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.85e-34,42;CL:0002368,8.51e-30,13;CL:0000223,8.28e-24,58;CL:0002159,1.03e-21,14;CL:0000066,4.05e-21,253;CL:0002621,2.30e-16,3;CL:0002166,2.97e-16,3;CL:0002328,4.60e-15,3;CL:0000362,1.72e-13,9;CL:0002202,2.08e-13,9;CL:0002632,2.08e-13,9;CL:0000240,2.09e-13,6;CL:0000311,2.09e-13,6;CL:0000079,2.09e-13,6;CL:0000237,2.09e-13,6;CL:0000036,2.09e-13,6;CL:0000357,2.09e-13,6;CL:0000114,2.09e-13,6;CL:0002077,9.51e-13,34;CL:0000244,5.28e-12,4;CL:0000731,5.28e-12,4;CL:0002251,3.10e-11,20;CL:0000317,1.35e-10,2;CL:1000448,1.35e-10,2;CL:0002308,1.35e-10,2;CL:0002140,1.35e-10,2;CL:0002321,2.82e-10,250;CL:0000312,1.49e-09,5;CL:0000622,3.35e-09,5;CL:0002231,6.68e-08,3;CL:0000154,9.64e-08,6;CL:0000068,1.35e-07,3;CL:0000069,1.35e-07,3;CL:0000307,1.35e-07,3;CL:0000377,1.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;2.23e-13;6!CL:0000114;2.23e-13;6!CL:0000223;2.96e-12;58!CL:0000377;1.30e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!1.72e-10!14 | |ontology_enrichment_disease=DOID:1749!1.72e-10!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.08e-13!169;UBERON:0000925!4.08e-13!169;UBERON:0006595!4.08e-13!169;UBERON:0001004!1.50e-12!72;UBERON:0000166!7.71e-10!21;UBERON:0005911!7.16e-09!82;UBERON:0003729!8.89e-09!5;UBERON:0000161!3.56e-08!35;UBERON:0001007!4.41e-08!155;UBERON:0001555!4.41e-08!155;UBERON:0007026!4.41e-08!155;UBERON:0000165!4.64e-08!28;UBERON:0000930!4.64e-08!28;UBERON:0000344!5.56e-08!12;UBERON:0005910!6.15e-08!6;UBERON:0007196!9.65e-08!14;UBERON:0001558!9.65e-08!14;UBERON:0001949!2.29e-07!3;UBERON:0003343!4.72e-07!4;UBERON:0004785!4.72e-07!4;UBERON:0000065!5.76e-07!53;UBERON:0004815!7.48e-07!3;UBERON:0002031!7.48e-07!3 | |ontology_enrichment_uberon=UBERON:0004119!4.08e-13!169;UBERON:0000925!4.08e-13!169;UBERON:0006595!4.08e-13!169;UBERON:0001004!1.50e-12!72;UBERON:0000166!7.71e-10!21;UBERON:0005911!7.16e-09!82;UBERON:0003729!8.89e-09!5;UBERON:0000161!3.56e-08!35;UBERON:0001007!4.41e-08!155;UBERON:0001555!4.41e-08!155;UBERON:0007026!4.41e-08!155;UBERON:0000165!4.64e-08!28;UBERON:0000930!4.64e-08!28;UBERON:0000344!5.56e-08!12;UBERON:0005910!6.15e-08!6;UBERON:0007196!9.65e-08!14;UBERON:0001558!9.65e-08!14;UBERON:0001949!2.29e-07!3;UBERON:0003343!4.72e-07!4;UBERON:0004785!4.72e-07!4;UBERON:0000065!5.76e-07!53;UBERON:0004815!7.48e-07!3;UBERON:0002031!7.48e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.30e-16;3!UBERON:0000486;6.75e-15;12!UBERON:0004815;1.02e-14;3!UBERON:0002031;1.02e-14;3!UBERON:0001708;2.49e-12;4!UBERON:0008895;2.49e-12;4!UBERON:0002419;1.25e-10;2!UBERON:0007771;1.25e-10;2!UBERON:0003297;1.25e-10;2!UBERON:0001821;1.25e-10;2!UBERON:0003487;1.25e-10;2!UBERON:0001820;1.25e-10;2!UBERON:0011159;5.93e-10;5!UBERON:0000365;1.14e-09;5!UBERON:0003729;1.85e-09;13!UBERON:0010371;4.46e-09;31!UBERON:0002185;4.92e-09;5!UBERON:0005910;3.97e-08;6!UBERON:0001003;5.02e-08;15!UBERON:0007376;5.02e-08;15!UBERON:0007196;7.64e-08;15!UBERON:0001558;7.64e-08;15!UBERON:0005911;8.55e-08;36!UBERON:0004807;1.46e-07;22!UBERON:0003929;2.93e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.30e-16,3;UBERON:0004815,4.60e-15,3;UBERON:0002031,4.60e-15,3;UBERON:0001708,2.59e-12,4;UBERON:0008895,2.59e-12,4;UBERON:0002419,1.35e-10,2;UBERON:0007771,1.35e-10,2;UBERON:0003297,1.35e-10,2;UBERON:0001821,1.35e-10,2;UBERON:0003487,1.35e-10,2;UBERON:0001820,1.35e-10,2;UBERON:0005089,1.35e-10,2;UBERON:0005088,1.35e-10,2;UBERON:0001004,3.19e-10,74;UBERON:0011159,6.12e-10,5;UBERON:0000365,1.08e-09,5;UBERON:0003729,1.85e-09,13;UBERON:0003102,2.24e-09,99;UBERON:0002185,3.07e-09,5;UBERON:0004119,6.16e-09,160;UBERON:0000925,6.16e-09,160;UBERON:0006595,6.16e-09,160;UBERON:0010188,2.37e-08,6;UBERON:0002539,2.37e-08,6;UBERON:0008816,2.37e-08,6;UBERON:0005910,3.78e-08,6;UBERON:0001003,5.43e-08,15;UBERON:0007376,5.43e-08,15;UBERON:0007383,5.43e-08,15;UBERON:0007196,6.04e-08,15;UBERON:0001558,6.04e-08,15 | |||
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| ||
|short_description=p@chr1:183213177..183213210,+ | |short_description=p@chr1:183213177..183213210,+ | ||
}} | }} |
Latest revision as of 01:11, 28 July 2015
Short description: | p@chr1:183213177..183213210, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183213177..183213210, + |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.30e-16 | 3 |
lower respiratory tract epithelium | 4.60e-15 | 3 |
epithelium of bronchus | 4.60e-15 | 3 |
jaw skeleton | 2.59e-12 | 4 |
splanchnocranium | 2.59e-12 | 4 |
skin gland | 1.35e-10 | 2 |
epidermis gland | 1.35e-10 | 2 |
gland of integumental system | 1.35e-10 | 2 |
sebaceous gland | 1.35e-10 | 2 |
skin sebaceous gland | 1.35e-10 | 2 |
sweat gland | 1.35e-10 | 2 |
sweat gland placode | 1.35e-10 | 2 |
sebaceous gland placode | 1.35e-10 | 2 |
respiratory system | 3.19e-10 | 74 |
primary subdivision of cranial skeletal system | 6.12e-10 | 5 |
urothelium | 1.08e-09 | 5 |
mouth mucosa | 1.85e-09 | 13 |
surface structure | 2.24e-09 | 99 |
bronchus | 3.07e-09 | 5 |
endoderm-derived structure | 6.16e-09 | 160 |
endoderm | 6.16e-09 | 160 |
presumptive endoderm | 6.16e-09 | 160 |
protuberance | 2.37e-08 | 6 |
pharyngeal arch | 2.37e-08 | 6 |
embryonic head | 2.37e-08 | 6 |
transitional epithelium | 3.78e-08 | 6 |
skin epidermis | 5.43e-08 | 15 |
outer epithelium | 5.43e-08 | 15 |
enveloping layer of ectoderm | 5.43e-08 | 15 |
tracheobronchial tree | 6.04e-08 | 15 |
lower respiratory tract | 6.04e-08 | 15 |