FFCP PHASE1:Hg19::chr1:183213228..183213235,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:183213228..183213235,+ | |||
|coexpression_cluster_id=C362 | |||
|description=CAGE_peak_at_chr1:183213228..183213235,+ | |||
|id=chr1:183213228..183213235,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.50e-32!43;CL:0002368!6.22e-23!13;CL:0000223!1.37e-22!59;CL:0000066!3.55e-20!254;CL:0002621!5.17e-16!3;CL:0002251!1.43e-13!21;CL:0002159!1.78e-13!13;CL:0000244!7.38e-12!4;CL:0000731!7.38e-12!4;CL:0000362!3.06e-10!8;CL:0000312!1.19e-09!5;CL:0000622!3.96e-09!5;CL:0002202!8.96e-09!9;CL:0002632!8.96e-09!9;CL:0000240!4.13e-08!6;CL:0000311!4.13e-08!6;CL:0000079!4.13e-08!6;CL:0000237!4.13e-08!6;CL:0000036!4.13e-08!6;CL:0000357!4.13e-08!6;CL:0000114!4.13e-08!6;CL:0002166!8.52e-08!3;CL:0000154!1.11e-07!6;CL:0002231!1.54e-07!3;CL:0000220!1.66e-07!246;CL:0002321!2.11e-07!248;CL:0002328!2.26e-07!3;CL:0002623!4.01e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002621;2.87e-53;3!CL:0002076;1.89e-11;42!CL:0000244;3.42e-11;4!CL:0000731;3.42e-11;4!CL:0000312;3.22e-09;5!CL:0002251;5.93e-09;20!CL:0000240;6.78e-08;6!CL:0000311;6.78e-08;6!CL:0000079;6.78e-08;6!CL:0000237;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,2.87e-53,3;CL:0000244,3.10e-11,4;CL:0000731,3.10e-11,4;CL:0002076,2.52e-09,42;CL:0000312,3.49e-09,5;CL:0002251,5.93e-09,20;CL:0000240,7.25e-08,6;CL:0000311,7.25e-08,6;CL:0000079,7.25e-08,6;CL:0000237,7.25e-08,6;CL:0000036,7.25e-08,6;CL:0000357,7.25e-08,6;CL:0000114,7.25e-08,6;CL:0000223,5.90e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000357;6.78e-08;6!CL:0000114;6.78e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!5.17e-16!3;UBERON:0001004!1.13e-13!72;UBERON:0004119!5.29e-11!169;UBERON:0000925!5.29e-11!169;UBERON:0006595!5.29e-11!169;UBERON:0004807!5.11e-10!28;UBERON:0000365!1.41e-09!5;UBERON:0005153!4.68e-09!37;UBERON:0000065!6.60e-09!53;UBERON:0005910!4.76e-08!6;UBERON:0000166!8.47e-08!21;UBERON:0000161!1.05e-07!35;UBERON:0005911!2.07e-07!82;UBERON:0004815!2.26e-07!3;UBERON:0002031!2.26e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.87e-53;3!UBERON:0000486;2.71e-30;12!UBERON:0003929;1.44e-23;7!UBERON:0003350;8.98e-21;8!UBERON:0001828;8.98e-21;8!UBERON:0003729;3.22e-13;13!UBERON:0010371;1.11e-12;31!UBERON:0005911;9.77e-10;36!UBERON:0000161;2.26e-09;19!UBERON:0000166;2.26e-09;19!UBERON:0000365;3.22e-09;5!UBERON:0000344;5.93e-09;20!UBERON:0004807;3.15e-08;22!UBERON:0005910;6.78e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.87e-53,3;UBERON:0003350,8.98e-21,8;UBERON:0001828,8.98e-21,8;UBERON:0003729,3.22e-13,13;UBERON:0000365,2.97e-09,5;UBERON:0000344,5.93e-09,20;UBERON:0000166,3.15e-08,22;UBERON:0005910,6.34e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,2.45471508531751,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,1.1240175325762,0.502644862058154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0.850650583454319,0.447792613514241,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0.460404944679482,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.661139661443912,0.768760269460425,3.95599408733211,0.2023155617111,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0,0.43050537267123,0,1.7737206141467,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.414432328326074,0.17071847709395,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:183213228..183213235,+ | |||
}} |
Latest revision as of 01:11, 28 July 2015
Short description: | p@chr1:183213228..183213235, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183213228..183213235, + |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 2.87e-53 | 3 |
transitional epithelial cell | 3.10e-11 | 4 |
urothelial cell | 3.10e-11 | 4 |
endo-epithelial cell | 2.52e-09 | 42 |
keratinocyte | 3.49e-09 | 5 |
epithelial cell of alimentary canal | 5.93e-09 | 20 |
stratified squamous epithelial cell | 7.25e-08 | 6 |
keratin accumulating cell | 7.25e-08 | 6 |
stratified epithelial cell | 7.25e-08 | 6 |
keratinizing barrier epithelial cell | 7.25e-08 | 6 |
epithelial fate stem cell | 7.25e-08 | 6 |
stratified epithelial stem cell | 7.25e-08 | 6 |
surface ectodermal cell | 7.25e-08 | 6 |
endodermal cell | 5.90e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.87e-53 | 3 |
epithelium of mucosa | 8.98e-21 | 8 |
gingiva | 8.98e-21 | 8 |
mouth mucosa | 3.22e-13 | 13 |
urothelium | 2.97e-09 | 5 |
mucosa | 5.93e-09 | 20 |
oral opening | 3.15e-08 | 22 |
transitional epithelium | 6.34e-08 | 6 |