FFCP PHASE1:Hg19::chr1:186277186..186277192,+: Difference between revisions
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|id=chr1:186277186..186277192,+
|short_description=p@chr1:186277186..186277192,+
|description=CAGE_peak_at_chr1:186277186..186277192,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:186277186..186277192,+ | |||
|coexpression_cluster_id=C536 | |||
|description=CAGE_peak_at_chr1:186277186..186277192,+ | |||
|id=chr1:186277186..186277192,+ | |||
|ontology_enrichment_celltype=CL:0000153!5.02e-26!9;CL:0000447!5.02e-26!9;CL:0000667!5.44e-18!6;CL:0000058!5.44e-18!6;CL:0000138!5.44e-18!6;CL:0000327!1.53e-16!14;CL:0000214!9.54e-10!3;CL:0002582!4.01e-09!3;CL:0000499!2.70e-08!27 | |||
|ontology_enrichment_celltype_v019=CL:0000153;8.65e-59;9!CL:0000447;8.65e-59;9!CL:0000138;4.94e-50;6!CL:0000327;1.25e-35;15!CL:0000499;1.92e-19;28!CL:0000151;2.57e-12;36!CL:0002521;2.74e-12;3!CL:0000214;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,7.45e-59,9;CL:0000447,7.45e-59,9;CL:0000058,3.84e-50,6;CL:0000138,3.84e-50,6;CL:0000327,1.14e-35,15;CL:0000499,1.84e-19,28;CL:0000151,2.75e-15,36;CL:0000214,2.89e-12,3;CL:0002521,3.24e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006915!9.54e-10!3;UBERON:0002018!9.54e-10!3;UBERON:0002217!9.54e-10!3;UBERON:0007616!9.54e-10!3;UBERON:0005418!7.76e-08!1;UBERON:0001389!7.76e-08!1;UBERON:0000026!7.76e-08!1;UBERON:0008784!7.76e-08!1;UBERON:0006058!7.76e-08!1;UBERON:0003663!7.76e-08!1;UBERON:0001383!7.76e-08!1;UBERON:0004256!7.76e-08!1;UBERON:0002529!7.76e-08!1;UBERON:0004708!7.76e-08!1;UBERON:0002101!7.76e-08!1;UBERON:0004709!7.76e-08!1;UBERON:0003661!7.76e-08!1;UBERON:0002471!7.76e-08!1;UBERON:0004357!7.76e-08!1;UBERON:0009872!7.76e-08!1;UBERON:0004347!7.76e-08!1;UBERON:0005420!7.76e-08!1;UBERON:0005732!7.76e-08!1;UBERON:0006057!7.76e-08!1;UBERON:0000978!7.76e-08!1;UBERON:0002103!7.76e-08!1;UBERON:0001665!7.76e-08!1;UBERON:0003823!7.76e-08!1;UBERON:0000154!7.76e-08!1;UBERON:0005733!7.76e-08!1;UBERON:0005730!7.76e-08!1;UBERON:0001013!2.10e-07!14;UBERON:0002363!2.31e-07!1;UBERON:0007647!2.31e-07!1;UBERON:0010115!2.31e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;2.74e-12;3!UBERON:0007616;2.74e-12;3!UBERON:0002217;2.74e-12;3!UBERON:0002018;2.74e-12;3!UBERON:0002190;2.74e-12;3!UBERON:0002072;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.89e-12,3;UBERON:0007616,2.89e-12,3;UBERON:0002217,2.89e-12,3;UBERON:0002018,2.89e-12,3;UBERON:0002190,3.24e-12,3;UBERON:0002072,7.49e-08,5 | |||
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|short_description=p@chr1:186277186..186277192,+ | |||
}} | }} |
Latest revision as of 01:30, 28 July 2015
Short description: | p@chr1:186277186..186277192, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186277186..186277192, + |
Coexpression cluster: | C536_Chondrocyte_Mallassezderived_liver_mesothelioma_Adipocyte_serous_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 7.45e-59 | 9 |
carbohydrate secreting cell | 7.45e-59 | 9 |
chondroblast | 3.84e-50 | 6 |
chondrocyte | 3.84e-50 | 6 |
extracellular matrix secreting cell | 1.14e-35 | 15 |
stromal cell | 1.84e-19 | 28 |
secretory cell | 2.75e-15 | 36 |
synovial cell | 2.89e-12 | 3 |
subcutaneous fat cell | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 2.89e-12 | 3 |
layer of synovial tissue | 2.89e-12 | 3 |
synovial joint | 2.89e-12 | 3 |
synovial membrane of synovial joint | 2.89e-12 | 3 |
subcutaneous adipose tissue | 3.24e-12 | 3 |
hypodermis | 7.49e-08 | 5 |