FFCP PHASE1:Hg19::chr1:20302092..20302101,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:20302092..20302101,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr1:20302092..20302101,+ | |description=CAGE_peak_at_chr1:20302092..20302101,+ | ||
|id=chr1:20302092..20302101,+ | |id=chr1:20302092..20302101,+ | ||
|ontology_enrichment_celltype=CL:0000135!2.46e-08!3;CL:0000386!2.46e-08!3;CL:0000388!2.46e-08!3 | |ontology_enrichment_celltype=CL:0000135!2.46e-08!3;CL:0000386!2.46e-08!3;CL:0000388!2.46e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000153;1.02e-10;9!CL:0000447;1.02e-10;9!CL:0000214;1.26e-08;3!CL:0000182;2.01e-08;12!CL:0000327;8.58e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,8.79e-11,9;CL:0000447,8.79e-11,9;CL:0000214,1.21e-08,3;CL:0000182,2.05e-08,12;CL:0000327,7.86e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0010226;3.67e-23;1!UBERON:0010115;3.67e-23;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.66e-14!115;UBERON:0000043!2.46e-08!3;UBERON:0004921!2.25e-07!129;UBERON:0004185!2.25e-07!129;UBERON:0002084!3.73e-07!1;UBERON:0002082!3.73e-07!1;UBERON:0004706!3.73e-07!1;UBERON:0002363!4.69e-07!1;UBERON:0007647!4.69e-07!1;UBERON:0010115!4.69e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;3.67e-23;1!UBERON:0002084;3.67e-23;1!UBERON:0002082;3.67e-23;1!UBERON:0002360;2.74e-12;2!UBERON:0000094;2.74e-12;2!UBERON:0010743;2.74e-12;2!UBERON:0002107;2.98e-11;19!UBERON:0006925;2.98e-11;19!UBERON:0002423;1.06e-08;25!UBERON:0006915;1.26e-08;3!UBERON:0007616;1.26e-08;3!UBERON:0004151;1.26e-08;3!UBERON:0002217;1.26e-08;3!UBERON:0002018;1.26e-08;3!UBERON:0002365;2.39e-07;31!UBERON:0002330;2.39e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,2.62e-23,1;UBERON:0002082,2.62e-23,1;UBERON:0010226,2.62e-23,1;UBERON:0002363,6.40e-23,1;UBERON:0007645,6.40e-23,1;UBERON:0007647,6.40e-23,1;UBERON:0010115,6.40e-23,1;UBERON:0002360,3.62e-12,2;UBERON:0000094,3.62e-12,2;UBERON:0010743,3.62e-12,2;UBERON:0002107,2.98e-11,19;UBERON:0006925,2.98e-11,19;UBERON:0008836,2.98e-11,19;UBERON:0008835,8.34e-10,22;UBERON:0003894,8.34e-10,22;UBERON:0009854,2.09e-09,23;UBERON:0007499,1.06e-08,25;UBERON:0009497,1.06e-08,25;UBERON:0000015,1.06e-08,25;UBERON:0002423,1.06e-08,25;UBERON:0006235,1.06e-08,25;UBERON:0004161,1.06e-08,25;UBERON:0004151,1.12e-08,3;UBERON:0006915,1.21e-08,3;UBERON:0007616,1.21e-08,3;UBERON:0002217,1.21e-08,3;UBERON:0002018,1.21e-08,3;UBERON:0009856,2.17e-08,26;UBERON:0002365,3.95e-07,31;UBERON:0002330,3.95e-07,31 | |||
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|short_description=p@chr1:20302092..20302101,+ | |short_description=p@chr1:20302092..20302101,+ | ||
}} | }} |
Latest revision as of 02:21, 28 July 2015
Short description: | p@chr1:20302092..20302101, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:20302092..20302101, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 8.79e-11 | 9 |
carbohydrate secreting cell | 8.79e-11 | 9 |
synovial cell | 1.21e-08 | 3 |
hepatocyte | 2.05e-08 | 12 |
extracellular matrix secreting cell | 7.86e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 2.62e-23 | 1 |
cardiac ventricle | 2.62e-23 | 1 |
future cardiac ventricle | 2.62e-23 | 1 |
dura mater | 6.40e-23 | 1 |
future meninx | 6.40e-23 | 1 |
ectomeninx | 6.40e-23 | 1 |
future dura mater | 6.40e-23 | 1 |
meninx | 3.62e-12 | 2 |
membrane organ | 3.62e-12 | 2 |
meningeal cluster | 3.62e-12 | 2 |
liver | 2.98e-11 | 19 |
digestive gland | 2.98e-11 | 19 |
liver bud | 2.98e-11 | 19 |
hepatic diverticulum | 8.34e-10 | 22 |
liver primordium | 8.34e-10 | 22 |
digestive tract diverticulum | 2.09e-09 | 23 |
epithelial sac | 1.06e-08 | 25 |
epithelium of foregut-midgut junction | 1.06e-08 | 25 |
anatomical boundary | 1.06e-08 | 25 |
hepatobiliary system | 1.06e-08 | 25 |
foregut-midgut junction | 1.06e-08 | 25 |
septum transversum | 1.06e-08 | 25 |
cardiac chamber | 1.12e-08 | 3 |
stratified squamous epithelium | 1.21e-08 | 3 |
layer of synovial tissue | 1.21e-08 | 3 |
synovial joint | 1.21e-08 | 3 |
synovial membrane of synovial joint | 1.21e-08 | 3 |
sac | 2.17e-08 | 26 |
exocrine gland | 3.95e-07 | 31 |
exocrine system | 3.95e-07 | 31 |