FFCP PHASE1:Hg19::chr1:20302329..20302340,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:20302329..20302340,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr1:20302329..20302340,- | |description=CAGE_peak_at_chr1:20302329..20302340,- | ||
|id=chr1:20302329..20302340,- | |id=chr1:20302329..20302340,- | ||
|ontology_enrichment_celltype=CL:0002322!2.82e-07!5 | |ontology_enrichment_celltype=CL:0002322!2.82e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.54e-11;12!CL:0000153;3.09e-07;9!CL:0000447;3.09e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.54e-11,12;CL:0000153,2.77e-07,9;CL:0000447,2.77e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.38e-15;1!UBERON:0010115;2.38e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.28e-22!115;UBERON:0004151!4.75e-13!3;UBERON:0003978!2.29e-12!3;UBERON:0009751!2.29e-12!3;UBERON:0000946!2.29e-12!3;UBERON:0002523!2.29e-12!3;UBERON:0005983!2.29e-12!3;UBERON:0002165!2.29e-12!3;UBERON:0002062!2.29e-12!3;UBERON:0007280!2.29e-12!3;UBERON:0002081!2.03e-09!2;UBERON:0002133!5.11e-09!2 | |ontology_enrichment_uberon=UBERON:0007023!1.28e-22!115;UBERON:0004151!4.75e-13!3;UBERON:0003978!2.29e-12!3;UBERON:0009751!2.29e-12!3;UBERON:0000946!2.29e-12!3;UBERON:0002523!2.29e-12!3;UBERON:0005983!2.29e-12!3;UBERON:0002165!2.29e-12!3;UBERON:0002062!2.29e-12!3;UBERON:0007280!2.29e-12!3;UBERON:0002081!2.03e-09!2;UBERON:0002133!5.11e-09!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002081;2.56e-29;2!UBERON:0004151;6.50e-20;3!UBERON:0002134;8.63e-16;1!UBERON:0005208;8.63e-16;1!UBERON:0004145;8.63e-16;1!UBERON:0005946;8.63e-16;1!UBERON:0005965;8.63e-16;1!UBERON:0002078;8.63e-16;1!UBERON:0002363;2.38e-15;1!UBERON:0002079;2.38e-15;1!UBERON:0002107;1.64e-12;19!UBERON:0006925;1.64e-12;19!UBERON:0002423;1.43e-09;25!UBERON:0002133;1.50e-08;2!UBERON:0002360;2.48e-08;2!UBERON:0000094;2.48e-08;2!UBERON:0010743;2.48e-08;2!UBERON:0002365;5.19e-08;31!UBERON:0002330;5.19e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002081,2.22e-29,2;UBERON:0010227,2.22e-29,2;UBERON:0004151,5.91e-20,3;UBERON:0002134,8.63e-16,1;UBERON:0005208,8.63e-16,1;UBERON:0005946,8.63e-16,1;UBERON:0005965,8.63e-16,1;UBERON:0002078,8.63e-16,1;UBERON:0002079,2.06e-15,1;UBERON:0002363,3.17e-15,1;UBERON:0007645,3.17e-15,1;UBERON:0007647,3.17e-15,1;UBERON:0010115,3.17e-15,1;UBERON:0002107,1.67e-12,19;UBERON:0006925,1.67e-12,19;UBERON:0008836,1.67e-12,19;UBERON:0008835,7.78e-11,22;UBERON:0003894,7.78e-11,22;UBERON:0009854,2.24e-10,23;UBERON:0007499,1.45e-09,25;UBERON:0009497,1.45e-09,25;UBERON:0000015,1.45e-09,25;UBERON:0002423,1.45e-09,25;UBERON:0006235,1.45e-09,25;UBERON:0004161,1.45e-09,25;UBERON:0009856,3.32e-09,26;UBERON:0002133,1.50e-08,2;UBERON:0002360,2.87e-08,2;UBERON:0000094,2.87e-08,2;UBERON:0010743,2.87e-08,2;UBERON:0002365,9.36e-08,31;UBERON:0002330,9.36e-08,31;UBERON:0002368,6.86e-07,35 | |||
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| ||
|short_description=p@chr1:20302329..20302340,- | |short_description=p@chr1:20302329..20302340,- | ||
}} | }} |
Latest revision as of 02:22, 28 July 2015
Short description: | p@chr1:20302329..20302340, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:20302329..20302340, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.54e-11 | 12 |
GAG secreting cell | 2.77e-07 | 9 |
carbohydrate secreting cell | 2.77e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cardiac atrium | 2.22e-29 | 2 |
future cardiac atrium | 2.22e-29 | 2 |
cardiac chamber | 5.91e-20 | 3 |
tricuspid valve | 8.63e-16 | 1 |
right atrium valve | 8.63e-16 | 1 |
outflow tract of atrium | 8.63e-16 | 1 |
outflow part of right atrium | 8.63e-16 | 1 |
right cardiac atrium | 8.63e-16 | 1 |
left cardiac atrium | 2.06e-15 | 1 |
dura mater | 3.17e-15 | 1 |
future meninx | 3.17e-15 | 1 |
ectomeninx | 3.17e-15 | 1 |
future dura mater | 3.17e-15 | 1 |
liver | 1.67e-12 | 19 |
digestive gland | 1.67e-12 | 19 |
liver bud | 1.67e-12 | 19 |
hepatic diverticulum | 7.78e-11 | 22 |
liver primordium | 7.78e-11 | 22 |
digestive tract diverticulum | 2.24e-10 | 23 |
epithelial sac | 1.45e-09 | 25 |
epithelium of foregut-midgut junction | 1.45e-09 | 25 |
anatomical boundary | 1.45e-09 | 25 |
hepatobiliary system | 1.45e-09 | 25 |
foregut-midgut junction | 1.45e-09 | 25 |
septum transversum | 1.45e-09 | 25 |
sac | 3.32e-09 | 26 |
atrioventricular valve | 1.50e-08 | 2 |
meninx | 2.87e-08 | 2 |
membrane organ | 2.87e-08 | 2 |
meningeal cluster | 2.87e-08 | 2 |
exocrine gland | 9.36e-08 | 31 |
exocrine system | 9.36e-08 | 31 |
endocrine gland | 6.86e-07 | 35 |