FFCP PHASE1:Hg19::chr1:203148907..203148922,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:203148907..203148922,+ | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_at_chr1:203148907..203148922,+ | |description=CAGE_peak_at_chr1:203148907..203148922,+ | ||
|id=chr1:203148907..203148922,+ | |id=chr1:203148907..203148922,+ | ||
|ontology_enrichment_celltype=CL:0000153!9.38e-17!9;CL:0000447!9.38e-17!9;CL:0000188!6.53e-15!9;CL:0000594!5.29e-12!3;CL:0000667!1.07e-11!6;CL:0000058!1.07e-11!6;CL:0000138!1.07e-11!6;CL:0000327!1.63e-10!14;CL:0000499!6.00e-09!27;CL:0002540!5.73e-07!6;CL:0000135!8.13e-07!3;CL:0000386!8.13e-07!3;CL:0000388!8.13e-07!3 | |ontology_enrichment_celltype=CL:0000153!9.38e-17!9;CL:0000447!9.38e-17!9;CL:0000188!6.53e-15!9;CL:0000594!5.29e-12!3;CL:0000667!1.07e-11!6;CL:0000058!1.07e-11!6;CL:0000138!1.07e-11!6;CL:0000327!1.63e-10!14;CL:0000499!6.00e-09!27;CL:0002540!5.73e-07!6;CL:0000135!8.13e-07!3;CL:0000386!8.13e-07!3;CL:0000388!8.13e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000153;1.69e-46;9!CL:0000447;1.69e-46;9!CL:0000138;1.83e-31;6!CL:0000327;7.73e-28;15!CL:0000499;4.01e-26;28!CL:0000235;5.78e-18;6!CL:0000135;5.30e-17;3!CL:0000388;5.30e-17;3!CL:0000214;8.90e-17;3!CL:0000151;5.14e-09;36!CL:0002540;7.19e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.90e-46,9;CL:0000447,1.90e-46,9;CL:0000058,1.98e-31,6;CL:0000138,1.98e-31,6;CL:0000327,8.30e-28,15;CL:0000499,4.07e-26,28;CL:0000235,7.09e-18,6;CL:0000135,4.90e-17,3;CL:0000388,4.90e-17,3;CL:0000214,9.26e-17,3;CL:0000151,2.03e-11,36;CL:0002540,6.77e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0010115;9.17e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000043!8.13e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;5.30e-17;3!UBERON:0000043;5.30e-17;3!UBERON:0007845;5.30e-17;3!UBERON:0006915;8.90e-17;3!UBERON:0007616;8.90e-17;3!UBERON:0002217;8.90e-17;3!UBERON:0002018;8.90e-17;3!UBERON:0001282;2.95e-13;1!UBERON:0009842;2.95e-13;1!UBERON:0003704;2.95e-13;1!UBERON:0001171;2.95e-13;1!UBERON:0001172;2.95e-13;1!UBERON:0002363;9.17e-13;1!UBERON:0002360;5.13e-07;2!UBERON:0000094;5.13e-07;2!UBERON:0010743;5.13e-07;2!UBERON:0004905;7.54e-07;8!UBERON:0000982;7.54e-07;8!UBERON:0004770;7.54e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.90e-17,3;UBERON:0000043,4.90e-17,3;UBERON:0007845,4.90e-17,3;UBERON:0006915,9.26e-17,3;UBERON:0007616,9.26e-17,3;UBERON:0002217,9.26e-17,3;UBERON:0002018,9.26e-17,3;UBERON:0001282,2.95e-13,1;UBERON:0009842,2.95e-13,1;UBERON:0003704,2.95e-13,1;UBERON:0001171,2.95e-13,1;UBERON:0001172,2.95e-13,1;UBERON:0002363,8.64e-13,1;UBERON:0007645,8.64e-13,1;UBERON:0007647,8.64e-13,1;UBERON:0010115,8.64e-13,1;UBERON:0002360,4.98e-07,2;UBERON:0000094,4.98e-07,2;UBERON:0010743,4.98e-07,2;UBERON:0004905,7.66e-07,8;UBERON:0000982,7.66e-07,8;UBERON:0004770,7.66e-07,8 | |||
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| ||
|short_description=p@chr1:203148907..203148922,+ | |short_description=p@chr1:203148907..203148922,+ | ||
}} | }} |
Latest revision as of 02:24, 28 July 2015
Short description: | p@chr1:203148907..203148922, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203148907..203148922, + |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.90e-46 | 9 |
carbohydrate secreting cell | 1.90e-46 | 9 |
chondroblast | 1.98e-31 | 6 |
chondrocyte | 1.98e-31 | 6 |
extracellular matrix secreting cell | 8.30e-28 | 15 |
stromal cell | 4.07e-26 | 28 |
macrophage | 7.09e-18 | 6 |
fibrocyte | 4.90e-17 | 3 |
tendon cell | 4.90e-17 | 3 |
synovial cell | 9.26e-17 | 3 |
secretory cell | 2.03e-11 | 36 |
mesenchymal stem cell of the bone marrow | 6.77e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 4.90e-17 | 3 |
tendon | 4.90e-17 | 3 |
regular connective tissue | 4.90e-17 | 3 |
stratified squamous epithelium | 9.26e-17 | 3 |
layer of synovial tissue | 9.26e-17 | 3 |
synovial joint | 9.26e-17 | 3 |
synovial membrane of synovial joint | 9.26e-17 | 3 |
intralobular bile duct | 2.95e-13 | 1 |
acinus | 2.95e-13 | 1 |
intrahepatic bile duct | 2.95e-13 | 1 |
portal lobule | 2.95e-13 | 1 |
hepatic acinus | 2.95e-13 | 1 |
dura mater | 8.64e-13 | 1 |
future meninx | 8.64e-13 | 1 |
ectomeninx | 8.64e-13 | 1 |
future dura mater | 8.64e-13 | 1 |
meninx | 4.98e-07 | 2 |
membrane organ | 4.98e-07 | 2 |
meningeal cluster | 4.98e-07 | 2 |
articulation | 7.66e-07 | 8 |
skeletal joint | 7.66e-07 | 8 |
articular system | 7.66e-07 | 8 |