FFCP PHASE1:Hg19::chr1:203152845..203152866,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:203152845..203152866,+ | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_at_chr1:203152845..203152866,+ | |description=CAGE_peak_at_chr1:203152845..203152866,+ | ||
|id=chr1:203152845..203152866,+ | |id=chr1:203152845..203152866,+ | ||
|ontology_enrichment_celltype=CL:0000153!5.13e-11!9;CL:0000447!5.13e-11!9;CL:0000135!3.61e-09!3;CL:0000386!3.61e-09!3;CL:0000388!3.61e-09!3;CL:0000499!2.93e-08!27;CL:0000667!7.15e-08!6;CL:0000058!7.15e-08!6;CL:0000138!7.15e-08!6;CL:0000235!8.64e-07!10;CL:0000327!9.29e-07!14 | |ontology_enrichment_celltype=CL:0000153!5.13e-11!9;CL:0000447!5.13e-11!9;CL:0000135!3.61e-09!3;CL:0000386!3.61e-09!3;CL:0000388!3.61e-09!3;CL:0000499!2.93e-08!27;CL:0000667!7.15e-08!6;CL:0000058!7.15e-08!6;CL:0000138!7.15e-08!6;CL:0000235!8.64e-07!10;CL:0000327!9.29e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000153;8.60e-38;9!CL:0000447;8.60e-38;9!CL:0000235;6.98e-26;6!CL:0000138;1.09e-25;6!CL:0000327;1.46e-22;15!CL:0000499;5.58e-21;28!CL:0002540;6.72e-15;6!CL:0000135;5.55e-14;3!CL:0000388;5.55e-14;3!CL:0000214;7.66e-14;3!CL:0002092;3.70e-09;10!CL:0000182;1.09e-07;12!CL:0000151;2.72e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,9.77e-38,9;CL:0000447,9.77e-38,9;CL:0000235,6.76e-26,6;CL:0000058,1.13e-25,6;CL:0000138,1.13e-25,6;CL:0000327,1.58e-22,15;CL:0000499,5.97e-21,28;CL:0002540,7.05e-15,6;CL:0000135,5.73e-14,3;CL:0000388,5.73e-14,3;CL:0000214,8.44e-14,3;CL:0000151,3.75e-09,36;CL:0002092,3.81e-09,10;CL:0000134,8.02e-08,354;CL:0000182,1.01e-07,12;CL:0002320,1.31e-07,361;CL:0000219,7.32e-07,386 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.54e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;6.44e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,6.14e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000043!3.61e-09!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;5.55e-14;3!UBERON:0000043;5.55e-14;3!UBERON:0007845;5.55e-14;3!UBERON:0006915;7.66e-14;3!UBERON:0007616;7.66e-14;3!UBERON:0002217;7.66e-14;3!UBERON:0002018;7.66e-14;3!UBERON:0001282;9.50e-11;1!UBERON:0009842;9.50e-11;1!UBERON:0003704;9.50e-11;1!UBERON:0001171;9.50e-11;1!UBERON:0001172;9.50e-11;1!UBERON:0002363;1.54e-10;1!UBERON:0002371;1.03e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,5.73e-14,3;UBERON:0000043,5.73e-14,3;UBERON:0007845,5.73e-14,3;UBERON:0006915,8.44e-14,3;UBERON:0007616,8.44e-14,3;UBERON:0002217,8.44e-14,3;UBERON:0002018,8.44e-14,3;UBERON:0001282,8.22e-11,1;UBERON:0009842,8.22e-11,1;UBERON:0003704,8.22e-11,1;UBERON:0001171,8.22e-11,1;UBERON:0001172,8.22e-11,1;UBERON:0002363,1.33e-10,1;UBERON:0007645,1.33e-10,1;UBERON:0007647,1.33e-10,1;UBERON:0010115,1.33e-10,1;UBERON:0001434,1.11e-09,100;UBERON:0002371,9.77e-09,76;UBERON:0001474,5.14e-08,82;UBERON:0002204,1.74e-07,167;UBERON:0002384,2.55e-07,371;UBERON:0004765,3.34e-07,90;UBERON:0002405,6.21e-07,93 | |||
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| ||
|short_description=p@chr1:203152845..203152866,+ | |short_description=p@chr1:203152845..203152866,+ | ||
}} | }} |
Latest revision as of 02:24, 28 July 2015
Short description: | p@chr1:203152845..203152866, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203152845..203152866, + |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 9.77e-38 | 9 |
carbohydrate secreting cell | 9.77e-38 | 9 |
macrophage | 6.76e-26 | 6 |
chondroblast | 1.13e-25 | 6 |
chondrocyte | 1.13e-25 | 6 |
extracellular matrix secreting cell | 1.58e-22 | 15 |
stromal cell | 5.97e-21 | 28 |
mesenchymal stem cell of the bone marrow | 7.05e-15 | 6 |
fibrocyte | 5.73e-14 | 3 |
tendon cell | 5.73e-14 | 3 |
synovial cell | 8.44e-14 | 3 |
secretory cell | 3.75e-09 | 36 |
bone marrow cell | 3.81e-09 | 10 |
mesenchymal cell | 8.02e-08 | 354 |
hepatocyte | 1.01e-07 | 12 |
connective tissue cell | 1.31e-07 | 361 |
motile cell | 7.32e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 5.73e-14 | 3 |
tendon | 5.73e-14 | 3 |
regular connective tissue | 5.73e-14 | 3 |
stratified squamous epithelium | 8.44e-14 | 3 |
layer of synovial tissue | 8.44e-14 | 3 |
synovial joint | 8.44e-14 | 3 |
synovial membrane of synovial joint | 8.44e-14 | 3 |
intralobular bile duct | 8.22e-11 | 1 |
acinus | 8.22e-11 | 1 |
intrahepatic bile duct | 8.22e-11 | 1 |
portal lobule | 8.22e-11 | 1 |
hepatic acinus | 8.22e-11 | 1 |
dura mater | 1.33e-10 | 1 |
future meninx | 1.33e-10 | 1 |
ectomeninx | 1.33e-10 | 1 |
future dura mater | 1.33e-10 | 1 |
skeletal system | 1.11e-09 | 100 |
bone marrow | 9.77e-09 | 76 |
bone element | 5.14e-08 | 82 |
musculoskeletal system | 1.74e-07 | 167 |
connective tissue | 2.55e-07 | 371 |
skeletal element | 3.34e-07 | 90 |
immune system | 6.21e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 6.14e-11 | 1 |