FFCP PHASE1:Hg19::chr1:203154393..203154416,+: Difference between revisions
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|id=chr1:203154393..203154416,+
|short_description=p@chr1:203154393..203154416,+
|description=CAGE_peak_at_chr1:203154393..203154416,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:203154393..203154416,+ | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_at_chr1:203154393..203154416,+ | |||
|id=chr1:203154393..203154416,+ | |||
|ontology_enrichment_celltype=CL:0000153!1.06e-09!9;CL:0000447!1.06e-09!9;CL:0000667!6.15e-08!6;CL:0000058!6.15e-08!6;CL:0000138!6.15e-08!6;CL:0000327!2.24e-07!14;CL:0000499!5.89e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000235;9.48e-34;6!CL:0000153;2.32e-30;9!CL:0000447;2.32e-30;9!CL:0000138;1.21e-23;6!CL:0000327;5.03e-23;15!CL:0000499;1.41e-18;28!CL:0000151;1.82e-09;36!CL:0002540;3.47e-09;6!CL:0000135;7.94e-09;3!CL:0000388;7.94e-09;3!CL:0000214;1.04e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,6.95e-34,6;CL:0000153,2.03e-30,9;CL:0000447,2.03e-30,9;CL:0000058,1.07e-23,6;CL:0000138,1.07e-23,6;CL:0000327,4.54e-23,15;CL:0000499,1.33e-18,28;CL:0000151,3.21e-11,36;CL:0002540,3.33e-09,6;CL:0000135,8.09e-09,3;CL:0000388,8.09e-09,3;CL:0000214,1.02e-08,3;CL:0000134,8.78e-07,354 | |||
|ontology_enrichment_development_v019=UBERON:0010115;4.38e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;2.36e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,2.36e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.81e-14!115;UBERON:0002020!7.14e-09!34;UBERON:0003528!7.14e-09!34;UBERON:0005743!2.35e-08!86;UBERON:0000073!2.84e-08!94;UBERON:0001016!2.84e-08!94;UBERON:0001049!5.85e-08!57;UBERON:0005068!5.85e-08!57;UBERON:0006241!5.85e-08!57;UBERON:0007135!5.85e-08!57;UBERON:0001017!1.24e-07!82;UBERON:0002308!1.76e-07!9;UBERON:0000125!1.76e-07!9;UBERON:0001893!1.80e-07!34;UBERON:0001869!4.61e-07!32;UBERON:0002791!7.18e-07!33;UBERON:0000955!7.72e-07!69;UBERON:0006238!7.72e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;7.94e-09;3!UBERON:0000043;7.94e-09;3!UBERON:0007845;7.94e-09;3!UBERON:0006915;1.04e-08;3!UBERON:0007616;1.04e-08;3!UBERON:0002217;1.04e-08;3!UBERON:0002018;1.04e-08;3!UBERON:0001282;2.99e-07;1!UBERON:0009842;2.99e-07;1!UBERON:0003704;2.99e-07;1!UBERON:0001171;2.99e-07;1!UBERON:0001172;2.99e-07;1!UBERON:0002107;3.32e-07;19!UBERON:0006925;3.32e-07;19!UBERON:0002363;4.38e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,8.09e-09,3;UBERON:0000043,8.09e-09,3;UBERON:0007845,8.09e-09,3;UBERON:0006915,1.02e-08,3;UBERON:0007616,1.02e-08,3;UBERON:0002217,1.02e-08,3;UBERON:0002018,1.02e-08,3;UBERON:0002371,2.90e-08,76;UBERON:0001434,3.76e-08,100;UBERON:0001474,1.68e-07,82;UBERON:0001282,2.99e-07,1;UBERON:0009842,2.99e-07,1;UBERON:0003704,2.99e-07,1;UBERON:0001171,2.99e-07,1;UBERON:0001172,2.99e-07,1;UBERON:0002107,3.16e-07,19;UBERON:0006925,3.16e-07,19;UBERON:0008836,3.16e-07,19;UBERON:0002363,4.25e-07,1;UBERON:0007645,4.25e-07,1;UBERON:0007647,4.25e-07,1;UBERON:0010115,4.25e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,10.5280961233537,11.4428749979051,2.3858578411533,13.6257763684738,0,0,0,0.0654895377488563,0,0,0,0.348259474598534,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95460407304877,35.5686483011641,17.6871083123587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,1.04007436911366,0,0,0,0,0,0,0.977208552881205,0,0,0,0,0.099972991182057,6.08118903205952,1.50677127429638,12.6500363689819,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0,1.27587750330633,1.49801404789436,0,0.414415513436035,0,0,0.271265023699736,0,0,0,0,0,0,2.0694614258501,0,0,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0,0.306923946576125,0,0.128139149255701,0,0,0,0.154209693802656,0,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.460511024178389,0,0.107420244868274,0.580066775656914,0.255679882248303,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,21.5329788003617,4.61012850143863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,5.53033375755224,3.35514161838624,3.00328455081435,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,2.05013945663194,0,0,0,0,0,0,0.0769502585037971,14.4706410925692,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,7.77194929430402,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0.137041924646751,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,2.02265412931063,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,4.54311924402056,0,0.387848869084652,1.19009341568421,0,0,0.320362237703084,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.776503360757966,0.248385611765534,0,0,0,0,0,0,0,0,0,0.554805861502613,2.27283606330107,20.3770000419586,11.567545880755,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,1.31570429747224,0,0,0,0,0,0,0.691292180758654,0,0,0.163565394255844,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.798169295285756,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0.115233987555779,23.3223692834889,0.271878931907327,0.131545547125698,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0,0,2.07216164163037,0,0.691259661814092,0,0.591660003652827,0.426067023795788,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0,7.43990036333503,81.805086267761,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0.78894425931944,0,0,0.213454691755431,0,0,0,0,0,0.665756774185513,0,0 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| ||
|short_description=p@chr1:203154393..203154416,+ | |||
}} | }} |
Latest revision as of 02:25, 28 July 2015
Short description: | p@chr1:203154393..203154416, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203154393..203154416, + |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 6.95e-34 | 6 |
GAG secreting cell | 2.03e-30 | 9 |
carbohydrate secreting cell | 2.03e-30 | 9 |
chondroblast | 1.07e-23 | 6 |
chondrocyte | 1.07e-23 | 6 |
extracellular matrix secreting cell | 4.54e-23 | 15 |
stromal cell | 1.33e-18 | 28 |
secretory cell | 3.21e-11 | 36 |
mesenchymal stem cell of the bone marrow | 3.33e-09 | 6 |
fibrocyte | 8.09e-09 | 3 |
tendon cell | 8.09e-09 | 3 |
synovial cell | 1.02e-08 | 3 |
mesenchymal cell | 8.78e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 8.09e-09 | 3 |
tendon | 8.09e-09 | 3 |
regular connective tissue | 8.09e-09 | 3 |
stratified squamous epithelium | 1.02e-08 | 3 |
layer of synovial tissue | 1.02e-08 | 3 |
synovial joint | 1.02e-08 | 3 |
synovial membrane of synovial joint | 1.02e-08 | 3 |
bone marrow | 2.90e-08 | 76 |
skeletal system | 3.76e-08 | 100 |
bone element | 1.68e-07 | 82 |
intralobular bile duct | 2.99e-07 | 1 |
acinus | 2.99e-07 | 1 |
intrahepatic bile duct | 2.99e-07 | 1 |
portal lobule | 2.99e-07 | 1 |
hepatic acinus | 2.99e-07 | 1 |
liver | 3.16e-07 | 19 |
digestive gland | 3.16e-07 | 19 |
liver bud | 3.16e-07 | 19 |
dura mater | 4.25e-07 | 1 |
future meninx | 4.25e-07 | 1 |
ectomeninx | 4.25e-07 | 1 |
future dura mater | 4.25e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 2.36e-07 | 1 |