FFCP PHASE1:Hg19::chr1:20813796..20813807,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:20813796..20813807,- | |||
|coexpression_cluster_id=C1064 | |||
|description=CAGE_peak_at_chr1:20813796..20813807,- | |description=CAGE_peak_at_chr1:20813796..20813807,- | ||
|id=chr1:20813796..20813807,- | |id=chr1:20813796..20813807,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.91e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.74e-15,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;5.86e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,6.77e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.17e-67!32;UBERON:0001893!1.58e-63!34;UBERON:0002791!1.97e-59!33;UBERON:0002020!1.32e-57!34;UBERON:0003528!1.32e-57!34;UBERON:0002619!1.52e-57!22;UBERON:0002780!3.69e-52!41;UBERON:0001890!3.69e-52!41;UBERON:0006240!3.69e-52!41;UBERON:0003080!7.76e-51!42;UBERON:0000956!1.71e-50!25;UBERON:0000203!1.71e-50!25;UBERON:0001950!4.76e-48!20;UBERON:0001049!5.04e-44!57;UBERON:0005068!5.04e-44!57;UBERON:0006241!5.04e-44!57;UBERON:0007135!5.04e-44!57;UBERON:0001017!1.05e-40!82;UBERON:0005743!1.36e-38!86;UBERON:0002616!1.37e-38!59;UBERON:0000955!5.22e-35!69;UBERON:0006238!5.22e-35!69;UBERON:0000073!1.77e-34!94;UBERON:0001016!1.77e-34!94;UBERON:0002346!3.58e-34!90;UBERON:0003056!8.13e-34!61;UBERON:0003075!5.02e-33!86;UBERON:0007284!5.02e-33!86;UBERON:0000349!4.56e-28!5;UBERON:0007023!1.18e-25!115;UBERON:0001871!1.43e-24!7;UBERON:0000200!2.87e-22!6;UBERON:0000033!2.28e-21!123;UBERON:0002420!3.94e-21!9;UBERON:0007245!3.94e-21!9;UBERON:0010009!3.94e-21!9;UBERON:0010011!3.94e-21!9;UBERON:0000454!3.94e-21!9;UBERON:0000153!3.85e-20!129;UBERON:0007811!3.85e-20!129;UBERON:0000924!1.58e-19!173;UBERON:0006601!1.58e-19!173;UBERON:0004121!1.76e-18!169;UBERON:0001876!1.55e-12!2;UBERON:0000369!1.80e-12!4;UBERON:0002435!1.80e-12!4;UBERON:0000204!1.80e-12!4;UBERON:0010082!1.80e-12!4;UBERON:0001870!2.70e-12!2;UBERON:0001954!2.70e-12!2;UBERON:0003022!2.70e-12!2;UBERON:0002421!2.70e-12!2;UBERON:0002600!2.70e-12!2;UBERON:0009663!3.38e-12!7;UBERON:0002360!4.90e-11!2;UBERON:0000094!4.90e-11!2;UBERON:0007645!4.90e-11!2;UBERON:0000025!1.16e-10!194;UBERON:0001872!4.47e-10!5;UBERON:0002308!1.63e-09!9;UBERON:0000125!1.63e-09!9;UBERON:0004111!2.05e-09!241;UBERON:0002771!2.86e-08!3;UBERON:0000064!6.09e-08!219;UBERON:0005383!6.72e-08!3;UBERON:0005382!6.72e-08!3;UBERON:0000477!7.22e-08!286;UBERON:0000483!1.19e-07!309;UBERON:0000119!1.61e-07!312;UBERON:0002022!4.85e-07!1;UBERON:0002702!6.08e-07!1 | |ontology_enrichment_uberon=UBERON:0001869!1.17e-67!32;UBERON:0001893!1.58e-63!34;UBERON:0002791!1.97e-59!33;UBERON:0002020!1.32e-57!34;UBERON:0003528!1.32e-57!34;UBERON:0002619!1.52e-57!22;UBERON:0002780!3.69e-52!41;UBERON:0001890!3.69e-52!41;UBERON:0006240!3.69e-52!41;UBERON:0003080!7.76e-51!42;UBERON:0000956!1.71e-50!25;UBERON:0000203!1.71e-50!25;UBERON:0001950!4.76e-48!20;UBERON:0001049!5.04e-44!57;UBERON:0005068!5.04e-44!57;UBERON:0006241!5.04e-44!57;UBERON:0007135!5.04e-44!57;UBERON:0001017!1.05e-40!82;UBERON:0005743!1.36e-38!86;UBERON:0002616!1.37e-38!59;UBERON:0000955!5.22e-35!69;UBERON:0006238!5.22e-35!69;UBERON:0000073!1.77e-34!94;UBERON:0001016!1.77e-34!94;UBERON:0002346!3.58e-34!90;UBERON:0003056!8.13e-34!61;UBERON:0003075!5.02e-33!86;UBERON:0007284!5.02e-33!86;UBERON:0000349!4.56e-28!5;UBERON:0007023!1.18e-25!115;UBERON:0001871!1.43e-24!7;UBERON:0000200!2.87e-22!6;UBERON:0000033!2.28e-21!123;UBERON:0002420!3.94e-21!9;UBERON:0007245!3.94e-21!9;UBERON:0010009!3.94e-21!9;UBERON:0010011!3.94e-21!9;UBERON:0000454!3.94e-21!9;UBERON:0000153!3.85e-20!129;UBERON:0007811!3.85e-20!129;UBERON:0000924!1.58e-19!173;UBERON:0006601!1.58e-19!173;UBERON:0004121!1.76e-18!169;UBERON:0001876!1.55e-12!2;UBERON:0000369!1.80e-12!4;UBERON:0002435!1.80e-12!4;UBERON:0000204!1.80e-12!4;UBERON:0010082!1.80e-12!4;UBERON:0001870!2.70e-12!2;UBERON:0001954!2.70e-12!2;UBERON:0003022!2.70e-12!2;UBERON:0002421!2.70e-12!2;UBERON:0002600!2.70e-12!2;UBERON:0009663!3.38e-12!7;UBERON:0002360!4.90e-11!2;UBERON:0000094!4.90e-11!2;UBERON:0007645!4.90e-11!2;UBERON:0000025!1.16e-10!194;UBERON:0001872!4.47e-10!5;UBERON:0002308!1.63e-09!9;UBERON:0000125!1.63e-09!9;UBERON:0004111!2.05e-09!241;UBERON:0002771!2.86e-08!3;UBERON:0000064!6.09e-08!219;UBERON:0005383!6.72e-08!3;UBERON:0005382!6.72e-08!3;UBERON:0000477!7.22e-08!286;UBERON:0000483!1.19e-07!309;UBERON:0000119!1.61e-07!312;UBERON:0002022!4.85e-07!1;UBERON:0002702!6.08e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001876;2.32e-57;2!UBERON:0000349;2.30e-51;5!UBERON:0002619;3.13e-44;22!UBERON:0000956;3.45e-39;25!UBERON:0000203;3.45e-39;25!UBERON:0001871;5.56e-37;6!UBERON:0001950;7.08e-34;20!UBERON:0002022;2.05e-29;1!UBERON:0003528;6.70e-26;34!UBERON:0002020;6.70e-26;34!UBERON:0002791;1.85e-25;32!UBERON:0001869;1.85e-25;32!UBERON:0001893;5.62e-23;34!UBERON:0002780;6.28e-20;41!UBERON:0001890;6.28e-20;41!UBERON:0000073;1.90e-15;53!UBERON:0002616;1.90e-15;53!UBERON:0002771;1.91e-15;2!UBERON:0001954;1.91e-15;2!UBERON:0003022;1.91e-15;2!UBERON:0006955;1.91e-15;2!UBERON:0004801;1.91e-15;2!UBERON:0002421;1.91e-15;2!UBERON:0002600;1.91e-15;2!UBERON:0002420;1.19e-13;9!UBERON:0007245;1.19e-13;9!UBERON:0010009;1.19e-13;9!UBERON:0010011;1.19e-13;9!UBERON:0000454;1.19e-13;9!UBERON:0001870;9.43e-11;3!UBERON:0000955;1.43e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,1.13e-57,2;UBERON:0000349,1.15e-51,5;UBERON:0002619,2.60e-44,22;UBERON:0000956,2.92e-39,25;UBERON:0000203,2.92e-39,25;UBERON:0001871,4.92e-37,6;UBERON:0001950,6.62e-34,20;UBERON:0002791,4.88e-31,32;UBERON:0001869,4.88e-31,32;UBERON:0002022,1.78e-29,1;UBERON:0003528,2.73e-29,34;UBERON:0002020,2.73e-29,34;UBERON:0001893,2.73e-29,34;UBERON:0002780,1.76e-24,41;UBERON:0001890,1.76e-24,41;UBERON:0003080,1.76e-24,41;UBERON:0006240,1.76e-24,41;UBERON:0000073,3.99e-19,53;UBERON:0002616,3.99e-19,53;UBERON:0001049,3.89e-18,56;UBERON:0005068,3.89e-18,56;UBERON:0006241,3.89e-18,56;UBERON:0007135,3.89e-18,56;UBERON:0003056,1.06e-16,61;UBERON:0001954,1.54e-15,2;UBERON:0003022,1.54e-15,2;UBERON:0002421,1.54e-15,2;UBERON:0002600,1.54e-15,2;UBERON:0002771,2.37e-15,2;UBERON:0006955,2.74e-15,2;UBERON:0004801,2.74e-15,2;UBERON:0000955,7.93e-15,68;UBERON:0006238,7.93e-15,68;UBERON:0002420,1.02e-13,9;UBERON:0007245,1.02e-13,9;UBERON:0010009,1.02e-13,9;UBERON:0010011,1.02e-13,9;UBERON:0000454,1.02e-13,9;UBERON:0001017,1.51e-12,81;UBERON:0003075,1.51e-12,82;UBERON:0007284,1.51e-12,82;UBERON:0002346,5.57e-12,86;UBERON:0001016,2.42e-11,89;UBERON:0001870,9.90e-11,3;UBERON:0010371,5.80e-10,104;UBERON:0007023,3.44e-09,114;UBERON:0010314,6.75e-08,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,2.2507106625682,0,0,0,0,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0.874813840149763,0.173624994933292,0,0.60298219312704,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13959432720582,0.782205530939212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.77064427945048,0,0,0,0,0,1.39723980313457,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495743057036009,0,0,0,0,0,0,0.578063025868136,0,0,0.615349092722265,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.317079050969534,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.394636641377094,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.747906392100062,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,2.2507106625682,0,0,0,0,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0.874813840149763,0.173624994933292,0,0.60298219312704,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13959432720582,0.782205530939212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.77064427945048,0,0,0,0,0,1.39723980313457,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495743057036009,0,0,0,0,0,0,0.578063025868136,0,0,0.615349092722265,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.317079050969534,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.394636641377094,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.747906392100062,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:20813796..20813807,- | |short_description=p@chr1:20813796..20813807,- | ||
}} | }} |
Latest revision as of 03:14, 28 July 2015
Short description: | p@chr1:20813796..20813807, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:20813796..20813807, - |
Coexpression cluster: | C1064_carcinoid_neuroectodermal_amygdala_insula_temporal_frontal_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.74e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 6.77e-07 | 5 |