FFCP PHASE1:Hg19::chr1:209783095..209783103,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:209783095..209783103,+ | |||
|coexpression_cluster_id=C3931 | |coexpression_cluster_id=C3931 | ||
|description=CAGE_peak_at_chr1:209783095..209783103,+ | |description=CAGE_peak_at_chr1:209783095..209783103,+ | ||
|id=chr1:209783095..209783103,+ | |id=chr1:209783095..209783103,+ | ||
|ontology_enrichment_celltype=CL:0002009!1.60e-43!65;CL:0000557!1.54e-39!71;CL:0002194!1.48e-36!63;CL:0000576!1.48e-36!63;CL:0000040!1.48e-36!63;CL:0000559!1.48e-36!63;CL:0000839!1.47e-32!70;CL:0002057!6.08e-32!42;CL:0000766!1.04e-29!76;CL:0000860!1.30e-29!45;CL:0000763!1.16e-28!112;CL:0000049!1.16e-28!112;CL:0000990!2.99e-26!8;CL:0000738!4.72e-22!140;CL:0000453!1.21e-21!5;CL:0000451!2.16e-21!10;CL:0002031!6.16e-21!124;CL:0000840!2.44e-18!5;CL:0001029!2.44e-18!5;CL:0002032!4.97e-18!165;CL:0000837!4.97e-18!165;CL:0002087!1.26e-17!119;CL:0000037!4.12e-17!172;CL:0000566!4.12e-17!172;CL:0000988!6.40e-16!182;CL:0001014!8.43e-15!2;CL:0001016!8.43e-15!2 | |ontology_enrichment_celltype=CL:0002009!1.60e-43!65;CL:0000557!1.54e-39!71;CL:0002194!1.48e-36!63;CL:0000576!1.48e-36!63;CL:0000040!1.48e-36!63;CL:0000559!1.48e-36!63;CL:0000839!1.47e-32!70;CL:0002057!6.08e-32!42;CL:0000766!1.04e-29!76;CL:0000860!1.30e-29!45;CL:0000763!1.16e-28!112;CL:0000049!1.16e-28!112;CL:0000990!2.99e-26!8;CL:0000738!4.72e-22!140;CL:0000453!1.21e-21!5;CL:0000451!2.16e-21!10;CL:0002031!6.16e-21!124;CL:0000840!2.44e-18!5;CL:0001029!2.44e-18!5;CL:0002032!4.97e-18!165;CL:0000837!4.97e-18!165;CL:0002087!1.26e-17!119;CL:0000037!4.12e-17!172;CL:0000566!4.12e-17!172;CL:0000988!6.40e-16!182;CL:0001014!8.43e-15!2;CL:0001016!8.43e-15!2 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.91e-79;2!CL:0001016;1.91e-79;2!CL:0000840;8.14e-60;5!CL:0000990;2.91e-40;8!CL:0000451;3.85e-33;10!CL:0000453;1.33e-32;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.34e-79,2;CL:0001016,2.34e-79,2;CL:0000840,8.15e-60,5;CL:0001029,8.15e-60,5;CL:0000990,2.91e-40,8;CL:0000451,3.85e-33,10;CL:0000453,1.44e-32,5;CL:0002009,1.38e-16,61;CL:0000557,3.48e-15,67;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0002031,8.28e-09,120;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.14e-34!80;UBERON:0001474!5.58e-32!86;UBERON:0004765!1.22e-26!101;UBERON:0001434!1.22e-26!101;UBERON:0002390!2.44e-26!102;UBERON:0003061!2.44e-26!102;UBERON:0002193!1.27e-23!112;UBERON:0002405!6.71e-23!115;UBERON:0002204!1.41e-19!167;UBERON:0003081!1.07e-12!216;UBERON:0002171!6.97e-08!1;UBERON:0006518!6.97e-08!1;UBERON:0008949!6.97e-08!1;UBERON:0000101!6.97e-08!1;UBERON:0002167!6.97e-08!1;UBERON:0002581!1.75e-07!1 | |ontology_enrichment_uberon=UBERON:0002371!1.14e-34!80;UBERON:0001474!5.58e-32!86;UBERON:0004765!1.22e-26!101;UBERON:0001434!1.22e-26!101;UBERON:0002390!2.44e-26!102;UBERON:0003061!2.44e-26!102;UBERON:0002193!1.27e-23!112;UBERON:0002405!6.71e-23!115;UBERON:0002204!1.41e-19!167;UBERON:0003081!1.07e-12!216;UBERON:0002171!6.97e-08!1;UBERON:0006518!6.97e-08!1;UBERON:0008949!6.97e-08!1;UBERON:0000101!6.97e-08!1;UBERON:0002167!6.97e-08!1;UBERON:0002581!1.75e-07!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-13,76;UBERON:0001474,1.45e-12,82;UBERON:0004765,1.62e-11,90;UBERON:0002405,3.61e-11,93;UBERON:0002390,1.23e-10,98;UBERON:0003061,1.23e-10,98;UBERON:0001434,1.95e-10,100;UBERON:0002193,1.03e-09,108 | |||
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|short_description=p@chr1:209783095..209783103,+ | |short_description=p@chr1:209783095..209783103,+ | ||
}} | }} |
Latest revision as of 03:19, 28 July 2015
Short description: | p@chr1:209783095..209783103, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209783095..209783103, + |
Coexpression cluster: | C3931_Dendritic_immature_migratory_CD14_Macrophage_lung_Aortic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.34e-79 | 2 |
immature CD1a-positive Langerhans cell | 2.34e-79 | 2 |
immature conventional dendritic cell | 8.15e-60 | 5 |
common dendritic progenitor | 8.15e-60 | 5 |
conventional dendritic cell | 2.91e-40 | 8 |
dendritic cell | 3.85e-33 | 10 |
Langerhans cell | 1.44e-32 | 5 |
macrophage dendritic cell progenitor | 1.38e-16 | 61 |
granulocyte monocyte progenitor cell | 3.48e-15 | 67 |
myeloid cell | 1.03e-09 | 108 |
common myeloid progenitor | 1.03e-09 | 108 |
hematopoietic lineage restricted progenitor cell | 8.28e-09 | 120 |
leukocyte | 7.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.72e-13 | 76 |
bone element | 1.45e-12 | 82 |
skeletal element | 1.62e-11 | 90 |
immune system | 3.61e-11 | 93 |
hematopoietic system | 1.23e-10 | 98 |
blood island | 1.23e-10 | 98 |
skeletal system | 1.95e-10 | 100 |
hemolymphoid system | 1.03e-09 | 108 |