FFCP PHASE1:Hg19::chr1:216680257..216680268,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:216680257..216680268,- | |||
|coexpression_cluster_id=C1850 | |||
|description=CAGE_peak_at_chr1:216680257..216680268,- | |description=CAGE_peak_at_chr1:216680257..216680268,- | ||
|id=chr1:216680257..216680268,- | |id=chr1:216680257..216680268,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;5.92e-26;1!UBERON:0010226;5.92e-26;1!UBERON:0006215;1.41e-09;3!UBERON:0003056;1.41e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;1.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.69e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.02e-22!57;UBERON:0005068!2.02e-22!57;UBERON:0006241!2.02e-22!57;UBERON:0007135!2.02e-22!57;UBERON:0007023!2.55e-21!115;UBERON:0002346!3.14e-20!90;UBERON:0003075!4.91e-20!86;UBERON:0007284!4.91e-20!86;UBERON:0000955!7.90e-20!69;UBERON:0006238!7.90e-20!69;UBERON:0002616!1.33e-19!59;UBERON:0000073!1.44e-19!94;UBERON:0001016!1.44e-19!94;UBERON:0005743!3.79e-18!86;UBERON:0001017!3.83e-18!82;UBERON:0000924!2.15e-15!173;UBERON:0006601!2.15e-15!173;UBERON:0004121!5.01e-15!169;UBERON:0000153!5.81e-15!129;UBERON:0007811!5.81e-15!129;UBERON:0002780!5.96e-14!41;UBERON:0001890!5.96e-14!41;UBERON:0006240!5.96e-14!41;UBERON:0003080!1.64e-13!42;UBERON:0000033!4.93e-13!123;UBERON:0003056!1.83e-12!61;UBERON:0001893!4.79e-12!34;UBERON:0001869!1.97e-11!32;UBERON:0002619!2.12e-11!22;UBERON:0004733!4.49e-11!12;UBERON:0002028!4.49e-11!12;UBERON:0007277!4.49e-11!12;UBERON:0003076!7.27e-11!15;UBERON:0003057!7.27e-11!15;UBERON:0002791!8.93e-11!33;UBERON:0002020!2.01e-10!34;UBERON:0003528!2.01e-10!34;UBERON:0004732!4.20e-10!13;UBERON:0000956!9.25e-10!25;UBERON:0000203!9.25e-10!25;UBERON:0000200!2.68e-09!6;UBERON:0002680!8.39e-09!9;UBERON:0001895!8.39e-09!9;UBERON:0010092!8.39e-09!9;UBERON:0000064!1.24e-08!219;UBERON:0001950!1.53e-08!20;UBERON:0002771!1.67e-07!3;UBERON:0000481!3.23e-07!347 | |ontology_enrichment_uberon=UBERON:0001049!2.02e-22!57;UBERON:0005068!2.02e-22!57;UBERON:0006241!2.02e-22!57;UBERON:0007135!2.02e-22!57;UBERON:0007023!2.55e-21!115;UBERON:0002346!3.14e-20!90;UBERON:0003075!4.91e-20!86;UBERON:0007284!4.91e-20!86;UBERON:0000955!7.90e-20!69;UBERON:0006238!7.90e-20!69;UBERON:0002616!1.33e-19!59;UBERON:0000073!1.44e-19!94;UBERON:0001016!1.44e-19!94;UBERON:0005743!3.79e-18!86;UBERON:0001017!3.83e-18!82;UBERON:0000924!2.15e-15!173;UBERON:0006601!2.15e-15!173;UBERON:0004121!5.01e-15!169;UBERON:0000153!5.81e-15!129;UBERON:0007811!5.81e-15!129;UBERON:0002780!5.96e-14!41;UBERON:0001890!5.96e-14!41;UBERON:0006240!5.96e-14!41;UBERON:0003080!1.64e-13!42;UBERON:0000033!4.93e-13!123;UBERON:0003056!1.83e-12!61;UBERON:0001893!4.79e-12!34;UBERON:0001869!1.97e-11!32;UBERON:0002619!2.12e-11!22;UBERON:0004733!4.49e-11!12;UBERON:0002028!4.49e-11!12;UBERON:0007277!4.49e-11!12;UBERON:0003076!7.27e-11!15;UBERON:0003057!7.27e-11!15;UBERON:0002791!8.93e-11!33;UBERON:0002020!2.01e-10!34;UBERON:0003528!2.01e-10!34;UBERON:0004732!4.20e-10!13;UBERON:0000956!9.25e-10!25;UBERON:0000203!9.25e-10!25;UBERON:0000200!2.68e-09!6;UBERON:0002680!8.39e-09!9;UBERON:0001895!8.39e-09!9;UBERON:0010092!8.39e-09!9;UBERON:0000064!1.24e-08!219;UBERON:0001950!1.53e-08!20;UBERON:0002771!1.67e-07!3;UBERON:0000481!3.23e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;5.92e-26;1!UBERON:0001736;5.92e-26;1!UBERON:0002082;5.92e-26;1!UBERON:0001905;1.07e-13;2!UBERON:0001829;1.07e-13;2!UBERON:0002757;1.07e-13;2!UBERON:0010134;1.07e-13;2!UBERON:0005408;1.07e-13;2!UBERON:0001899;1.07e-13;2!UBERON:0002680;5.51e-12;9!UBERON:0001895;5.51e-12;9!UBERON:0000988;1.41e-09;3!UBERON:0004151;1.41e-09;3!UBERON:0004733;3.13e-09;12!UBERON:0002028;3.13e-09;12!UBERON:0004732;1.36e-08;13!UBERON:0003296;1.69e-07;4!UBERON:0010133;1.69e-07;4!UBERON:0002784;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,3.58e-26,1;UBERON:0006298,3.58e-26,1;UBERON:0002084,9.79e-26,1;UBERON:0002082,9.79e-26,1;UBERON:0010226,9.79e-26,1;UBERON:0001829,8.28e-14,2;UBERON:0001905,1.21e-13,2;UBERON:0002757,1.21e-13,2;UBERON:0010134,1.21e-13,2;UBERON:0005408,1.21e-13,2;UBERON:0001899,1.21e-13,2;UBERON:0002680,4.42e-12,9;UBERON:0001895,4.42e-12,9;UBERON:0010092,4.42e-12,9;UBERON:0000988,1.10e-09,3;UBERON:0004151,1.67e-09,3;UBERON:0004733,2.66e-09,12;UBERON:0002028,2.66e-09,12;UBERON:0007277,2.66e-09,12;UBERON:0004732,1.17e-08,13;UBERON:0003076,1.27e-07,15;UBERON:0003057,1.27e-07,15;UBERON:0003296,1.80e-07,4;UBERON:0010133,1.80e-07,4;UBERON:0002784,1.80e-07,4 | |||
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| ||
|short_description=p@chr1:216680257..216680268,- | |short_description=p@chr1:216680257..216680268,- | ||
}} | }} |
Latest revision as of 03:54, 28 July 2015
Short description: | p@chr1:216680257..216680268, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:216680257..216680268, - |
Coexpression cluster: | C1850_small_pineal_pons_placenta_eye_heart_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
submandibular gland | 3.58e-26 | 1 |
submandibular gland primordium | 3.58e-26 | 1 |
heart left ventricle | 9.79e-26 | 1 |
cardiac ventricle | 9.79e-26 | 1 |
future cardiac ventricle | 9.79e-26 | 1 |
major salivary gland | 8.28e-14 | 2 |
pineal body | 1.21e-13 | 2 |
regional part of epithalamus | 1.21e-13 | 2 |
secretory circumventricular organ | 1.21e-13 | 2 |
circumventricular organ | 1.21e-13 | 2 |
epithalamus | 1.21e-13 | 2 |
regional part of metencephalon | 4.42e-12 | 9 |
metencephalon | 4.42e-12 | 9 |
future metencephalon | 4.42e-12 | 9 |
pons | 1.10e-09 | 3 |
cardiac chamber | 1.67e-09 | 3 |
segmental subdivision of hindbrain | 2.66e-09 | 12 |
hindbrain | 2.66e-09 | 12 |
presumptive hindbrain | 2.66e-09 | 12 |
segmental subdivision of nervous system | 1.17e-08 | 13 |
posterior neural tube | 1.27e-07 | 15 |
chordal neural plate | 1.27e-07 | 15 |
gland of diencephalon | 1.80e-07 | 4 |
neuroendocrine gland | 1.80e-07 | 4 |
regional part of diencephalon | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.69e-07 | 4 |