FFCP PHASE1:Hg19::chr1:218636802..218636805,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:218636802..218636805,- | |||
|description=CAGE_peak_at_chr1:218636802..218636805,- | |description=CAGE_peak_at_chr1:218636802..218636805,- | ||
|id=chr1:218636802..218636805,- | |id=chr1:218636802..218636805,- | ||
|ontology_enrichment_celltype=CL:0002057!9.80e-23!42;CL:0000860!1.24e-20!45;CL:0002194!7.03e-16!63;CL:0000576!7.03e-16!63;CL:0000040!7.03e-16!63;CL:0000559!7.03e-16!63;CL:0002009!4.04e-15!65;CL:0000766!4.26e-15!76;CL:0000557!2.30e-14!71;CL:0000839!2.03e-13!70;CL:0000763!4.76e-11!112;CL:0000049!4.76e-11!112;CL:0000219!8.77e-07!390 | |ontology_enrichment_celltype=CL:0002057!9.80e-23!42;CL:0000860!1.24e-20!45;CL:0002194!7.03e-16!63;CL:0000576!7.03e-16!63;CL:0000040!7.03e-16!63;CL:0000559!7.03e-16!63;CL:0002009!4.04e-15!65;CL:0000766!4.26e-15!76;CL:0000557!2.30e-14!71;CL:0000839!2.03e-13!70;CL:0000763!4.76e-11!112;CL:0000049!4.76e-11!112;CL:0000219!8.77e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000226;2.11e-17;3!CL:0000842;2.11e-17;3!CL:0002032;1.10e-13;1!CL:0000557;1.10e-13;1!CL:0002393;1.72e-09;6!CL:0002397;1.72e-09;6!CL:0000576;1.61e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000226,3.20e-17,3;CL:0000842,3.20e-17,3;CL:0000557,2.01e-08,67;CL:0000860,1.88e-07,42;CL:0002057,1.88e-07,42;CL:0002194,3.45e-07,59;CL:0000576,3.45e-07,59;CL:0000040,3.45e-07,59;CL:0000559,3.45e-07,59;CL:0002009,6.07e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.10e-13;1!UBERON:0008814;1.75e-07;2!UBERON:0010056;1.75e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4231;1.09e-07;2!DOID:1907;1.09e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,1.05e-07,2;DOID:1907,1.05e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.63e-14!80;UBERON:0001474!2.04e-13!86;UBERON:0002390!1.80e-12!102;UBERON:0003061!1.80e-12!102;UBERON:0004765!8.83e-11!101;UBERON:0001434!8.83e-11!101;UBERON:0002193!1.91e-10!112;UBERON:0002405!3.56e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;1.10e-13;1!UBERON:0002360;1.75e-07;2!UBERON:0000094;1.75e-07;2!UBERON:0010743;1.75e-07;2!UBERON:0002390;8.01e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,1.42e-13,1;UBERON:0007645,1.42e-13,1;UBERON:0007647,1.42e-13,1;UBERON:0010115,1.42e-13,1;UBERON:0002390,2.40e-11,98;UBERON:0003061,2.40e-11,98;UBERON:0002193,3.43e-10,108;UBERON:0002371,1.44e-09,76;UBERON:0001474,8.17e-09,82;UBERON:0004765,5.78e-08,90;UBERON:0002405,1.11e-07,93;UBERON:0002360,1.99e-07,2;UBERON:0000094,1.99e-07,2;UBERON:0010743,1.99e-07,2;UBERON:0001434,4.33e-07,100 | |||
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| ||
|short_description=p@chr1:218636802..218636805,- | |short_description=p@chr1:218636802..218636805,- | ||
}} | }} |
Latest revision as of 03:59, 28 July 2015
Short description: | p@chr1:218636802..218636805, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:218636802..218636805, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
single nucleate cell | 3.20e-17 | 3 |
mononuclear cell | 3.20e-17 | 3 |
granulocyte monocyte progenitor cell | 2.01e-08 | 67 |
classical monocyte | 1.88e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.88e-07 | 42 |
monopoietic cell | 3.45e-07 | 59 |
monocyte | 3.45e-07 | 59 |
monoblast | 3.45e-07 | 59 |
promonocyte | 3.45e-07 | 59 |
macrophage dendritic cell progenitor | 6.07e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
dura mater | 1.42e-13 | 1 |
future meninx | 1.42e-13 | 1 |
ectomeninx | 1.42e-13 | 1 |
future dura mater | 1.42e-13 | 1 |
hematopoietic system | 2.40e-11 | 98 |
blood island | 2.40e-11 | 98 |
hemolymphoid system | 3.43e-10 | 108 |
bone marrow | 1.44e-09 | 76 |
bone element | 8.17e-09 | 82 |
skeletal element | 5.78e-08 | 90 |
immune system | 1.11e-07 | 93 |
meninx | 1.99e-07 | 2 |
membrane organ | 1.99e-07 | 2 |
meningeal cluster | 1.99e-07 | 2 |
skeletal system | 4.33e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 1.05e-07 | 2 |
malignant fibroxanthoma | 1.05e-07 | 2 |