FFCP PHASE1:Hg19::chr1:22974092..22974109,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:22974092..22974109,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_at_chr1:22974092..22974109,+ | |description=CAGE_peak_at_chr1:22974092..22974109,+ | ||
|id=chr1:22974092..22974109,+ | |id=chr1:22974092..22974109,+ | ||
|ontology_enrichment_celltype=CL:0002619!9.82e-08!3;CL:0000235!2.11e-07!10 | |ontology_enrichment_celltype=CL:0002619!9.82e-08!3;CL:0000235!2.11e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000235;2.17e-26;6!CL:0002619;3.69e-20;3!CL:0000840;4.90e-10;5!CL:0000990;7.84e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.30e-26,6;CL:0002619,3.70e-20,3;CL:0002194,9.58e-11,59;CL:0000576,9.58e-11,59;CL:0000040,9.58e-11,59;CL:0000559,9.58e-11,59;CL:0002009,2.48e-10,61;CL:0000840,5.21e-10,5;CL:0001029,5.21e-10,5;CL:0000839,2.09e-09,66;CL:0000557,3.07e-09,67;CL:0000766,1.82e-08,72;CL:0000990,8.16e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0004872;4.09e-14;7!UBERON:0006965;8.45e-13;2!UBERON:0010115;1.25e-07;1!UBERON:0010227;3.10e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-65!115;UBERON:0001049!9.51e-29!57;UBERON:0005068!9.51e-29!57;UBERON:0006241!9.51e-29!57;UBERON:0007135!9.51e-29!57;UBERON:0002780!3.28e-22!41;UBERON:0001890!3.28e-22!41;UBERON:0006240!3.28e-22!41;UBERON:0002616!6.35e-22!59;UBERON:0003080!1.62e-21!42;UBERON:0001017!7.35e-21!82;UBERON:0005743!1.21e-20!86;UBERON:0003075!1.16e-19!86;UBERON:0007284!1.16e-19!86;UBERON:0002020!2.47e-19!34;UBERON:0003528!2.47e-19!34;UBERON:0001893!4.18e-19!34;UBERON:0000955!1.38e-18!69;UBERON:0006238!1.38e-18!69;UBERON:0002346!2.52e-18!90;UBERON:0002791!5.74e-18!33;UBERON:0000073!1.05e-17!94;UBERON:0001016!1.05e-17!94;UBERON:0001869!1.52e-16!32;UBERON:0003056!7.82e-14!61;UBERON:0000062!6.68e-13!511;UBERON:0002420!1.21e-12!9;UBERON:0007245!1.21e-12!9;UBERON:0010009!1.21e-12!9;UBERON:0010011!1.21e-12!9;UBERON:0000454!1.21e-12!9;UBERON:0002308!2.67e-12!9;UBERON:0000125!2.67e-12!9;UBERON:0002619!4.93e-12!22;UBERON:0001950!1.62e-11!20;UBERON:0000956!3.01e-10!25;UBERON:0000203!3.01e-10!25;UBERON:0000153!3.22e-10!129;UBERON:0007811!3.22e-10!129;UBERON:0000025!1.49e-09!194;UBERON:0009663!2.35e-09!7;UBERON:0000033!7.07e-09!123;UBERON:0000467!9.47e-09!625;UBERON:0000480!1.07e-08!626;UBERON:0000468!1.10e-08!659;UBERON:0003076!2.36e-08!15;UBERON:0003057!2.36e-08!15;UBERON:0001871!2.56e-08!7;UBERON:0002298!5.86e-08!8;UBERON:0000200!1.17e-07!6;UBERON:0000477!1.55e-07!286;UBERON:0004121!2.01e-07!169;UBERON:0004111!2.32e-07!241;UBERON:0000922!3.11e-07!612;UBERON:0000924!4.86e-07!173;UBERON:0006601!4.86e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.64e-09;3!UBERON:0002363;1.25e-07;1!UBERON:0000029;1.61e-07;1!UBERON:0002079;3.10e-07;1!UBERON:0002038;3.10e-07;1!UBERON:0009661;3.10e-07;1!UBERON:0002950;3.10e-07;1!UBERON:0001891;3.10e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.58e-10,93;UBERON:0002106,2.64e-09,3;UBERON:0004854,2.64e-09,3;UBERON:0009034,2.64e-09,3;UBERON:0002095,2.64e-09,3;UBERON:0004782,2.64e-09,3;UBERON:0003281,2.64e-09,3;UBERON:0009664,2.64e-09,3;UBERON:0002296,2.64e-09,3;UBERON:0005602,2.64e-09,3;UBERON:0001179,2.64e-09,3;UBERON:0006293,2.64e-09,3;UBERON:0007023,9.41e-09,114;UBERON:0002193,1.65e-08,108;UBERON:0002390,3.29e-08,98;UBERON:0003061,3.29e-08,98;UBERON:0002371,6.39e-08,76;UBERON:0002363,1.33e-07,1;UBERON:0007645,1.33e-07,1;UBERON:0007647,1.33e-07,1;UBERON:0010115,1.33e-07,1;UBERON:0000029,1.51e-07,1;UBERON:0002038,2.21e-07,1;UBERON:0009661,2.21e-07,1;UBERON:0002950,2.21e-07,1;UBERON:0001891,2.21e-07,1;UBERON:0009616,2.21e-07,1;UBERON:0010286,2.21e-07,1;UBERON:0002079,2.83e-07,1;UBERON:0001474,3.34e-07,82 | |||
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| ||
|short_description=p@chr1:22974092..22974109,+ | |short_description=p@chr1:22974092..22974109,+ | ||
}} | }} |
Latest revision as of 04:54, 28 July 2015
Short description: | p@chr1:22974092..22974109, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:22974092..22974109, + |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.30e-26 | 6 |
adult endothelial progenitor cell | 3.70e-20 | 3 |
monopoietic cell | 9.58e-11 | 59 |
monocyte | 9.58e-11 | 59 |
monoblast | 9.58e-11 | 59 |
promonocyte | 9.58e-11 | 59 |
macrophage dendritic cell progenitor | 2.48e-10 | 61 |
immature conventional dendritic cell | 5.21e-10 | 5 |
common dendritic progenitor | 5.21e-10 | 5 |
myeloid lineage restricted progenitor cell | 2.09e-09 | 66 |
granulocyte monocyte progenitor cell | 3.07e-09 | 67 |
myeloid leukocyte | 1.82e-08 | 72 |
conventional dendritic cell | 8.16e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
immune system | 2.58e-10 | 93 |
spleen | 2.64e-09 | 3 |
gastrointestinal system mesentery | 2.64e-09 | 3 |
stomach region | 2.64e-09 | 3 |
mesentery | 2.64e-09 | 3 |
gastrointestinal system serosa | 2.64e-09 | 3 |
mesentery of stomach | 2.64e-09 | 3 |
gut mesentery | 2.64e-09 | 3 |
dorsal mesentery | 2.64e-09 | 3 |
dorsal mesogastrium | 2.64e-09 | 3 |
peritoneal cavity | 2.64e-09 | 3 |
spleen primordium | 2.64e-09 | 3 |
adult organism | 9.41e-09 | 114 |
hemolymphoid system | 1.65e-08 | 108 |
hematopoietic system | 3.29e-08 | 98 |
blood island | 3.29e-08 | 98 |
bone marrow | 6.39e-08 | 76 |
dura mater | 1.33e-07 | 1 |
future meninx | 1.33e-07 | 1 |
ectomeninx | 1.33e-07 | 1 |
future dura mater | 1.33e-07 | 1 |
lymph node | 1.51e-07 | 1 |
substantia nigra | 2.21e-07 | 1 |
midbrain nucleus | 2.21e-07 | 1 |
regional part of midbrain | 2.21e-07 | 1 |
midbrain | 2.21e-07 | 1 |
presumptive midbrain | 2.21e-07 | 1 |
midbrain neural tube | 2.21e-07 | 1 |
left cardiac atrium | 2.83e-07 | 1 |
bone element | 3.34e-07 | 82 |