FFCP PHASE1:Hg19::chr1:22974301..22974317,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:22974301..22974317,+ | |||
|coexpression_cluster_id=C67 | |coexpression_cluster_id=C67 | ||
|description=CAGE_peak_at_chr1:22974301..22974317,+ | |description=CAGE_peak_at_chr1:22974301..22974317,+ | ||
|id=chr1:22974301..22974317,+ | |id=chr1:22974301..22974317,+ | ||
|ontology_enrichment_celltype=CL:0002619;3.25e-20;3!CL:0000235;1.44e-16;6 | |ontology_enrichment_celltype=CL:0002619!1.59e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002619;3.25e-20;3!CL:0000235;1.44e-16;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002619,3.26e-20,3;CL:0000235,8.71e-17,6;CL:0002194,4.77e-07,59;CL:0000576,4.77e-07,59;CL:0000040,4.77e-07,59;CL:0000559,4.77e-07,59;CL:0002009,8.98e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0004872;5.66e-14;7!UBERON:0010115;8.81e-08;1!UBERON:0010227;1.61e-07;1!UBERON:0003124;3.10e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002106;3.90e-09;3!UBERON:0000029;8.00e-08;1!UBERON:0002363;8.81e-08;1!UBERON:0002171;1.03e-07;1!UBERON:0006518;1.03e-07;1!UBERON:0008949;1.03e-07;1!UBERON:0000101;1.03e-07;1!UBERON:0002167;1.03e-07;1!UBERON:0002079;1.61e-07;1!UBERON:0001301;1.61e-07;1!UBERON:0007029;3.10e-07;1 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.01e-72!115;UBERON:0001049!3.50e-28!57;UBERON:0005068!3.50e-28!57;UBERON:0006241!3.50e-28!57;UBERON:0007135!3.50e-28!57;UBERON:0001017!1.27e-24!82;UBERON:0005743!2.64e-24!86;UBERON:0003080!1.65e-23!42;UBERON:0002616!4.05e-23!59;UBERON:0000955!1.28e-22!69;UBERON:0006238!1.28e-22!69;UBERON:0002780!4.32e-22!41;UBERON:0001890!4.32e-22!41;UBERON:0006240!4.32e-22!41;UBERON:0001893!1.64e-21!34;UBERON:0000073!6.70e-21!94;UBERON:0001016!6.70e-21!94;UBERON:0002791!2.02e-20!33;UBERON:0002020!1.06e-19!34;UBERON:0003528!1.06e-19!34;UBERON:0003075!4.27e-19!86;UBERON:0007284!4.27e-19!86;UBERON:0001869!4.88e-19!32;UBERON:0002346!8.93e-18!90;UBERON:0002619!4.80e-17!22;UBERON:0003056!4.33e-15!61;UBERON:0000153!8.50e-15!129;UBERON:0007811!8.50e-15!129;UBERON:0000956!1.50e-14!25;UBERON:0000203!1.50e-14!25;UBERON:0001950!1.54e-14!20;UBERON:0000062!1.45e-12!511;UBERON:0000033!2.16e-12!123;UBERON:0004121!2.12e-09!169;UBERON:0000924!6.20e-09!173;UBERON:0006601!6.20e-09!173;UBERON:0000468!1.41e-08!659;UBERON:0000467!3.41e-08!625;UBERON:0000480!3.87e-08!626;UBERON:0000025!7.71e-08!194;UBERON:0002298!1.92e-07!8;UBERON:0000922!2.74e-07!612;UBERON:0001871!3.55e-07!7;UBERON:0000477!7.91e-07!286;UBERON:0000200!9.67e-07!6;UBERON:0004111!9.67e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.90e-09;3!UBERON:0000029;8.00e-08;1!UBERON:0002363;8.81e-08;1!UBERON:0002171;1.03e-07;1!UBERON:0006518;1.03e-07;1!UBERON:0008949;1.03e-07;1!UBERON:0000101;1.03e-07;1!UBERON:0002167;1.03e-07;1!UBERON:0002079;1.61e-07;1!UBERON:0001301;1.61e-07;1!UBERON:0007029;3.10e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.28e-10,114;UBERON:0002106,3.52e-09,3;UBERON:0004854,3.52e-09,3;UBERON:0009034,3.52e-09,3;UBERON:0002095,3.52e-09,3;UBERON:0004782,3.52e-09,3;UBERON:0003281,3.52e-09,3;UBERON:0009664,3.52e-09,3;UBERON:0002296,3.52e-09,3;UBERON:0005602,3.52e-09,3;UBERON:0001179,3.52e-09,3;UBERON:0006293,3.52e-09,3;UBERON:0000029,8.00e-08,1;UBERON:0002363,8.54e-08,1;UBERON:0007645,8.54e-08,1;UBERON:0007647,8.54e-08,1;UBERON:0010115,8.54e-08,1;UBERON:0002171,9.71e-08,1;UBERON:0006518,9.71e-08,1;UBERON:0008949,9.71e-08,1;UBERON:0000101,9.71e-08,1;UBERON:0002167,9.71e-08,1;UBERON:0001301,1.72e-07,1;UBERON:0002079,1.83e-07,1;UBERON:0002405,2.57e-07,93;UBERON:0007029,2.66e-07,1 | |||
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| ||
|short_description=p@chr1:22974301..22974317,+ | |short_description=p@chr1:22974301..22974317,+ | ||
}} | }} |
Latest revision as of 04:54, 28 July 2015
Short description: | p@chr1:22974301..22974317, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:22974301..22974317, + |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 3.26e-20 | 3 |
macrophage | 8.71e-17 | 6 |
monopoietic cell | 4.77e-07 | 59 |
monocyte | 4.77e-07 | 59 |
monoblast | 4.77e-07 | 59 |
promonocyte | 4.77e-07 | 59 |
macrophage dendritic cell progenitor | 8.98e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.28e-10 | 114 |
spleen | 3.52e-09 | 3 |
gastrointestinal system mesentery | 3.52e-09 | 3 |
stomach region | 3.52e-09 | 3 |
mesentery | 3.52e-09 | 3 |
gastrointestinal system serosa | 3.52e-09 | 3 |
mesentery of stomach | 3.52e-09 | 3 |
gut mesentery | 3.52e-09 | 3 |
dorsal mesentery | 3.52e-09 | 3 |
dorsal mesogastrium | 3.52e-09 | 3 |
peritoneal cavity | 3.52e-09 | 3 |
spleen primordium | 3.52e-09 | 3 |
lymph node | 8.00e-08 | 1 |
dura mater | 8.54e-08 | 1 |
future meninx | 8.54e-08 | 1 |
ectomeninx | 8.54e-08 | 1 |
future dura mater | 8.54e-08 | 1 |
lower lobe of right lung | 9.71e-08 | 1 |
right lung lobe | 9.71e-08 | 1 |
lower lobe of lung | 9.71e-08 | 1 |
lobe of lung | 9.71e-08 | 1 |
right lung | 9.71e-08 | 1 |
epididymis | 1.72e-07 | 1 |
left cardiac atrium | 1.83e-07 | 1 |
immune system | 2.57e-07 | 93 |
surface | 2.66e-07 | 1 |