FFCP PHASE1:Hg19::chr1:243893857..243893870,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:243893857..243893870,- | |||
|coexpression_cluster_id=C1310 | |||
|description=CAGE_peak_at_chr1:243893857..243893870,- | |description=CAGE_peak_at_chr1:243893857..243893870,- | ||
|id=chr1:243893857..243893870,- | |id=chr1:243893857..243893870,- | ||
|ontology_enrichment_celltype=CL:0002619!9.78e-08!3;CL:0000763!1.81e-07!112;CL:0000049!1.81e-07!112;CL:0002621!9.30e-07!3 | |ontology_enrichment_celltype=CL:0002619!9.78e-08!3;CL:0000763!1.81e-07!112;CL:0000049!1.81e-07!112;CL:0002621!9.30e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,5.20e-07,108;CL:0000049,5.20e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0010122;6.57e-08;2 | |||
|ontology_enrichment_disease=DOID:1749!1.39e-11!14;DOID:8692!4.92e-08!31;DOID:1240!9.08e-07!39 | |ontology_enrichment_disease=DOID:1749!1.39e-11!14;DOID:8692!4.92e-08!31;DOID:1240!9.08e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.24e-20;31!DOID:1240;2.03e-15;39!DOID:225;4.72e-15;1!DOID:2531;1.22e-09;51!DOID:0060083;1.22e-09;51!DOID:74;3.56e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.03e-20,31;DOID:1240,3.90e-16,39;DOID:2531,6.41e-16,51;DOID:0060083,6.41e-16,51;DOID:225,4.73e-15,1;DOID:74,3.56e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.76e-16!57;UBERON:0005068!7.76e-16!57;UBERON:0006241!7.76e-16!57;UBERON:0007135!7.76e-16!57;UBERON:0002020!1.77e-15!34;UBERON:0003528!1.77e-15!34;UBERON:0002791!2.68e-14!33;UBERON:0007023!7.03e-14!115;UBERON:0002616!9.40e-14!59;UBERON:0001893!9.41e-14!34;UBERON:0002780!1.28e-13!41;UBERON:0001890!1.28e-13!41;UBERON:0006240!1.28e-13!41;UBERON:0002308!3.35e-13!9;UBERON:0000125!3.35e-13!9;UBERON:0003080!3.54e-13!42;UBERON:0000955!6.47e-13!69;UBERON:0006238!6.47e-13!69;UBERON:0001017!1.05e-11!82;UBERON:0001869!2.07e-11!32;UBERON:0005743!7.78e-11!86;UBERON:0000033!8.31e-11!123;UBERON:0002420!2.03e-10!9;UBERON:0007245!2.03e-10!9;UBERON:0010009!2.03e-10!9;UBERON:0010011!2.03e-10!9;UBERON:0000454!2.03e-10!9;UBERON:0009663!3.90e-10!7;UBERON:0000153!6.70e-10!129;UBERON:0007811!6.70e-10!129;UBERON:0000073!3.67e-09!94;UBERON:0001016!3.67e-09!94;UBERON:0003075!4.06e-09!86;UBERON:0007284!4.06e-09!86;UBERON:0000369!1.82e-08!4;UBERON:0002435!1.82e-08!4;UBERON:0000204!1.82e-08!4;UBERON:0010082!1.82e-08!4;UBERON:0002346!1.97e-08!90;UBERON:0002619!4.73e-08!22;UBERON:0003056!1.32e-07!61;UBERON:0005383!3.85e-07!3;UBERON:0005382!3.85e-07!3;UBERON:0000349!6.70e-07!5;UBERON:0000956!7.40e-07!25;UBERON:0000203!7.40e-07!25;UBERON:0001949!9.30e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;6.57e-08;2!UBERON:0001954;6.57e-08;2!UBERON:0003022;6.57e-08;2!UBERON:0002421;6.57e-08;2!UBERON:0002600;6.57e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,5.02e-08,2;UBERON:0010122,5.02e-08,2;UBERON:0001954,5.74e-08,2;UBERON:0003022,5.74e-08,2;UBERON:0002421,5.74e-08,2;UBERON:0002600,5.74e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.671746422719773,0.647787332037959,1.28787783817093,0.436194716338694,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0.344745680736619,0,0,0.376484679085209,0.272906150057846,0,0,0,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,1.08006287447623,0,0,0,1.47024129588619,0,0,0,0,0.798317485731266,0,0,0,1.12318871245384,1.59764275323235,0,0,0,0.481764225311099,0.605399121573143,0.425846237690326,0.343505344755765,2.15068535015921,1.11838053946208,2.33588798396672,2.9308214310306,0,0,0,0,0,0.561421621224659,0,0,0.111443384277478,0,0,0,0,0,0.422008249231538,0.111308705022906,1.81284261649436,0,0.19924798825107,0,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,1.77148277162768,0.482385754501632,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.783939179315021,0.435296032902013,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0.480952921509202,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0.135904206073614,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0.250381861413,0,0.665574309221114,0,0,0.74988244777264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,6.29481205195431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0,0,0.161475645631851,0,0.687034029507179,0,0.550285795565037,0.693153996902029,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.253663240775627,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0.271878931907327,0.197318320688547,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0.569822880276821,0,0,0,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p@chr1:243893857..243893870,- | |short_description=p@chr1:243893857..243893870,- | ||
}} | }} |
Latest revision as of 05:53, 28 July 2015
Short description: | p@chr1:243893857..243893870, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:243893857..243893870, - |
Coexpression cluster: | C1310_myelodysplastic_acute_granulocyte_biphenotypic_CD14_anaplastic_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 5.20e-07 | 108 |
common myeloid progenitor | 5.20e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 5.02e-08 | 2 |
future caudate nucleus | 5.02e-08 | 2 |
Ammon's horn | 5.74e-08 | 2 |
lobe parts of cerebral cortex | 5.74e-08 | 2 |
hippocampal formation | 5.74e-08 | 2 |
limbic lobe | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.03e-20 | 31 |
leukemia | 3.90e-16 | 39 |
hematologic cancer | 6.41e-16 | 51 |
immune system cancer | 6.41e-16 | 51 |
syndrome | 4.73e-15 | 1 |
hematopoietic system disease | 3.56e-08 | 2 |