FFCP PHASE1:Hg19::chr1:26609014..26609025,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:26609014..26609025,- | |||
|coexpression_cluster_id=C149 | |||
|description=CAGE_peak_at_chr1:26609014..26609025,- | |description=CAGE_peak_at_chr1:26609014..26609025,- | ||
|id=chr1:26609014..26609025,- | |id=chr1:26609014..26609025,- | ||
|ontology_enrichment_celltype=CL:0000839!2.10e-10!70;CL:0000557!3.40e-10!71;CL:0000860!7.39e-10!45;CL:0002274!7.45e-10!5;CL:0000457!7.45e-10!5;CL:0002191!7.45e-10!5;CL:0000097!7.45e-10!5;CL:0000831!7.45e-10!5;CL:0002028!7.45e-10!5;CL:0002057!2.56e-09!42;CL:0000766!3.10e-09!76;CL:0002194!5.38e-07!63;CL:0000576!5.38e-07!63;CL:0000040!5.38e-07!63;CL:0000559!5.38e-07!63 | |ontology_enrichment_celltype=CL:0000839!2.10e-10!70;CL:0000557!3.40e-10!71;CL:0000860!7.39e-10!45;CL:0002274!7.45e-10!5;CL:0000457!7.45e-10!5;CL:0002191!7.45e-10!5;CL:0000097!7.45e-10!5;CL:0000831!7.45e-10!5;CL:0002028!7.45e-10!5;CL:0002057!2.56e-09!42;CL:0000766!3.10e-09!76;CL:0002194!5.38e-07!63;CL:0000576!5.38e-07!63;CL:0000040!5.38e-07!63;CL:0000559!5.38e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000228;5.05e-34;1!CL:0002372;5.05e-34;1!CL:0002582;2.59e-12;3!CL:0000056;1.44e-09;4!CL:0000737;1.44e-09;4!CL:0002188;6.55e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,3.61e-34,1;CL:0002372,3.61e-34,1;CL:0002582,3.24e-12,3;CL:0000737,1.32e-09,4;CL:0000515,1.32e-09,4;CL:0002188,5.73e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000515;1.44e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.48e-08!80;UBERON:0001474!1.16e-07!86;UBERON:0000007!2.14e-07!2;UBERON:0002405!9.11e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;9.07e-18;2!UBERON:0003296;1.44e-09;4!UBERON:0010133;1.44e-09;4!UBERON:0002021;5.35e-08;5!UBERON:0002780;1.68e-07;41!UBERON:0001890;1.68e-07;41!UBERON:0001950;2.60e-07;20!UBERON:0002619;9.39e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,9.07e-18,2;UBERON:0003296,1.44e-09,4;UBERON:0010133,1.44e-09,4;UBERON:0002021,5.35e-08,5;UBERON:0002780,7.94e-08,41;UBERON:0001890,7.94e-08,41;UBERON:0003080,7.94e-08,41;UBERON:0006240,7.94e-08,41;UBERON:0001950,2.69e-07,20;UBERON:0002619,9.67e-07,22 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0.727752183563449,0.464858073811369,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0.612167784741805,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.264145302039678,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03850885836724,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,4.51256001329661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,1.21393120847326,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.303114792872958,0,0,0,0.213233981900981,0,0,0.0620747142958579,0.112131862580613,0.190941474834495,0,0,0,0,0,0.665320713092027,0,0.426909383510862,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:26609014..26609025,- | |short_description=p@chr1:26609014..26609025,- | ||
}} | }} |
Latest revision as of 06:36, 28 July 2015
Short description: | p@chr1:26609014..26609025, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:26609014..26609025, - |
Coexpression cluster: | C149_occipital_medial_brain_amygdala_parietal_cerebral_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 3.61e-34 | 1 |
myotube | 3.61e-34 | 1 |
visceral preadipocyte | 3.24e-12 | 3 |
striated muscle cell | 1.32e-09 | 4 |
skeletal muscle myoblast | 1.32e-09 | 4 |
glomerular endothelial cell | 5.73e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 9.07e-18 | 2 |
gland of diencephalon | 1.44e-09 | 4 |
neuroendocrine gland | 1.44e-09 | 4 |
occipital lobe | 5.35e-08 | 5 |
regional part of forebrain | 7.94e-08 | 41 |
forebrain | 7.94e-08 | 41 |
anterior neural tube | 7.94e-08 | 41 |
future forebrain | 7.94e-08 | 41 |
neocortex | 2.69e-07 | 20 |
regional part of cerebral cortex | 9.67e-07 | 22 |