FFCP PHASE1:Hg19::chr1:32799709..32799739,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-482bp_to_BX648622_5end | |||
|cluster_id=chr1:32799709..32799739,- | |||
|coexpression_cluster_id=C1476 | |||
|description=CAGE_peak_1_at_BX648622_5end | |||
|id=chr1:32799709..32799739,- | |||
|ontology_enrichment_celltype=CL:0002319!2.07e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.14e-08;6!CL:0000404;3.14e-08;6!CL:0002319;7.72e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.05e-09,8;CL:0000540,3.05e-08,6;CL:0000031,3.05e-08,6;CL:0000404,3.05e-08,6;CL:0002319,4.82e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;3.14e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.31e-15!94;UBERON:0001016!8.31e-15!94;UBERON:0005743!1.35e-14!86;UBERON:0001017!1.96e-14!82;UBERON:0000025!7.89e-10!194;UBERON:0000955!8.57e-10!69;UBERON:0006238!8.57e-10!69;UBERON:0001049!2.54e-09!57;UBERON:0005068!2.54e-09!57;UBERON:0006241!2.54e-09!57;UBERON:0007135!2.54e-09!57;UBERON:0002346!3.67e-09!90;UBERON:0000483!4.32e-09!309;UBERON:0000119!5.16e-09!312;UBERON:0002616!1.54e-08!59;UBERON:0003075!2.45e-08!86;UBERON:0007284!2.45e-08!86;UBERON:0004111!2.37e-07!241;UBERON:0002020!2.50e-07!34;UBERON:0003528!2.50e-07!34;UBERON:0000477!4.05e-07!286;UBERON:0001893!4.69e-07!34;UBERON:0002791!4.89e-07!33;UBERON:0003056!7.26e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.09e-12,81;UBERON:0001016,3.96e-11,89;UBERON:0002346,8.59e-11,86;UBERON:0003075,1.08e-09,82;UBERON:0007284,1.08e-09,82;UBERON:0001049,4.80e-08,56;UBERON:0005068,4.80e-08,56;UBERON:0006241,4.80e-08,56;UBERON:0007135,4.80e-08,56;UBERON:0010371,6.26e-08,104 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,1.0007329835313,0.893922188854576,0.872338524100369,0,1.26343974685366,0,0.491467873003018,2.09340350391728,0.218441372130172,0.263766978228454,0.866364470720326,0,2.6893005858071,1.20538905604795,4.38186054232424,1.95173119516203,1.84681587115182,3.26401105990805,0.940364164434263,2.0036519099174,2.73748850145768,1.25542639594803,0.229240217243854,0.656804715599566,0.393553906568396,0,0.383829398097213,0.464448369948228,0.919421224478927,0.30120591877825,0,0.852139206383318,2.70121541726101,0.587200878669695,0,0.601633342410425,0.217010870715852,0.223915474239924,0,0,2.18097358169347,1.13362783106643,1.21292030593908,1.62700325833979,0,0.309706370895104,0.575384784644301,0.256160706529101,1.18241114944293,0.689491361473237,0,0,3.57660445130949,1.36453075028923,3.59557575112135,3.97909060082173,3.53021929783703,1.27867425159808,0.659702600373432,0.199463657621632,0.426224750532694,1.45104619314292,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,1.81619850790011,0.368277635987565,0.949387162322653,0.422510572623884,0.637812899895131,0.419317291016752,0.112328631146495,0,0,0.285012743741249,0.99458338599545,0.182664153764634,0,0,0,0,0,0,1.98313461835459,0,0,1.17447437874188,1.52909291250092,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0.25618263945135,0.260118695119756,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0,0,0.34362744548263,0,0.637130828648193,0,0,0,0,0,0.236777252044017,0,0,0,0.289648807765598,2.43806866313962,7.37770945674,1.66221330396589,0,0.50133791063589,0.724232594804119,0.795285947051099,0,1.70162670895322,1.99556457716308,1.58102614247627,0.196468613246569,0.364295288292542,0,0,0.174129737299267,0,0.238490624305342,0,0,0.79504962946682,0.860234595106124,1.38856200643038,1.13061588384802,1.25849830862972,1.37559020970034,0.208994966536811,2.84258435086262,1.06729878806013,0.66944122552934,2.01414658554573,3.04108842287405,2.19655851793353,0.735326160691737,1.62028389576352,0.982297011124877,0,0,0,0.949265659568129,0.549605231791222,0,0,0,0,1.13967460498122,0,0,0.354668382198357,0,2.1349799145941,0.49333509683432,0.622422070799533,0.134710672069688,1.63461903113459,0.756787138224657,1.15235184896,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0,0.421352420106746,0,0.368502951935304,0,0,0,0,1.43723628363248,0.336672227908132,0,0,0,0,0,1.92834711372036,0,0,0.211931901159562,0,0.206105058476878,0.257640540045629,0,0,0.194874010322397,0.252433774244115,0.0920498986422993,0.323292113637624,0.355009592516614,0.201504196455281,0.339121184620975,0.193260853163297,0,0.286804595389004,1.70763188581434,3.18071443971565,1.74290914304278,1.24393266018445,1.7662459561294,6.93456982244077,0,0,0,0,0,0.473227200159376,0.337169380156203,0.241011029883482,0.110293972732394,0,0,0.539325232640658,0.196221465125346,0,6.64339909162183,2.80483547606892,2.057870056657,1.47008711385542,0,0.982827216677626,0,1.32438929824395,0.245976877086227,0.857839051492628,1.09750285408626,0,0,0.0925884451585296,0,0,4.3299402607582,1.27523445472584,0.234817388471643,2.30986316417718,0.925971025153221,1.52203321787679,2.37061319387782,1.71697232418975,0,0.468008530278475,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0.952468414382536,1.14596527667483,1.17217447210047,3.4214489204541,1.13110241973656,0.901029173531752,4.0015700568281,0.112131084345361,0.43596006883328,0.5867062865676,0.258543431515556,0,0,0.531876233169741,0,0.771622122786426,5.67396528093113,1.0656887160644,0.428933980974443,2.17048642156577,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.599837947092342,0,0,0,0.239624855491583,0,2.85273810081437,0.579125226670317,0.205476322550383,0.179060963239896,0.112085143993527,0.197030760201927,0,0.256686072559497,1.52456774533478,3.90419561572865,8.50617694055465,3.68535783735567,21.6899175562076,2.99602809578873,2.99161459204025,0.414415513436035,0.36807447515742,1.00034104211935,1.08506009479894,0.623912584592421,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.783204629850962,2.40200396667599,0.413536052245775,0.431428401637234,0.426910231213777,0.909382714338778,0,0.30239029332968,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0,0,0.519254429183621,0,0.846016147141356,1.80455823272956,0.276242966807689,0.918515585316854,0.364182336013434,0.655622074797121,1.35359883872224,1.30926073077505,1.56869953835371,0,0.211103257785751,2.27466768141793,3.57196781080683,0.863663664408557,1.54227252690289,2.16757150035082,3.51182841698397,0.509752546090077,0.831076008928724,0.895499018888713,0,0,2.3080511260475,0.656029291399411,0.650756789328606,0.309123034943167,1.09883357782012,0.495056999523528,0,0,0,0.96670718292122,0.154048617114644,1.5350367472613,0.137836572484531,0.322260734604821,0.580066775656914,0.255679882248303,1.15741646340759,0.991709492165869,0.576570202095319,0,0.10115778085555,1.39453664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| |||
|short_description=p1@BX648622 | |||
}} |
Latest revision as of 07:20, 28 July 2015
Short description: | p1@BX648622 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BX648622_5end |
Coexpression cluster: | C1476_Neurons_iPS_occipital_temporal_parietal_duodenum_spinal |
Association with transcript: | -482bp_to_BX648622_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.05e-09 | 8 |
neuron | 3.05e-08 | 6 |
neuroblast | 3.05e-08 | 6 |
electrically signaling cell | 3.05e-08 | 6 |
neural cell | 4.82e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.09e-12 | 81 |
nervous system | 3.96e-11 | 89 |
neurectoderm | 8.59e-11 | 86 |
neural plate | 1.08e-09 | 82 |
presumptive neural plate | 1.08e-09 | 82 |
neural tube | 4.80e-08 | 56 |
neural rod | 4.80e-08 | 56 |
future spinal cord | 4.80e-08 | 56 |
neural keel | 4.80e-08 | 56 |
ecto-epithelium | 6.26e-08 | 104 |