FFCP PHASE1:Hg19::chr1:78401534..78401545,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:78401534..78401545,+
|short_description=p@chr1:78401534..78401545,+
|description=CAGE_peak_at_chr1:78401534..78401545,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:78401534..78401545,+ | |||
|description=CAGE_peak_at_chr1:78401534..78401545,+ | |||
|id=chr1:78401534..78401545,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000680;3.14e-29;7!CL:0002504;3.75e-26;3!CL:1000279;3.75e-26;3!CL:1000280;3.75e-26;3!CL:0000594;4.68e-25;3!CL:0000515;4.22e-12;3!CL:0002605;7.35e-12;3!CL:0000056;2.68e-09;4!CL:0000188;9.75e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,5.75e-26,3;CL:1000279,5.75e-26,3;CL:1000280,5.75e-26,3;CL:0000594,6.54e-25,3;CL:0002605,6.96e-12,3;CL:0000680,2.88e-10,58;CL:0000056,2.88e-10,58;CL:0000355,2.88e-10,58;CL:0000515,2.57e-09,4;CL:0000188,1.09e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0010226;3.74e-10;1!UBERON:0010227;4.46e-10;1!CL:0000515;2.68e-09;4!CL:0000355;1.13e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.90e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.04e-30;31!UBERON:0001015;1.04e-30;31!UBERON:0000383;1.04e-30;31!UBERON:0001134;1.38e-24;16!UBERON:0002036;1.38e-24;16!UBERON:0004151;1.21e-12;3!UBERON:0001723;4.22e-12;3!UBERON:0001033;4.22e-12;3!UBERON:0002084;3.74e-10;1!UBERON:0002082;3.74e-10;1!UBERON:0002079;4.46e-10;1!UBERON:0001389;1.61e-09;1!UBERON:0002171;1.61e-09;1!UBERON:0000026;1.61e-09;1!UBERON:0008784;1.61e-09;1!UBERON:0006058;1.61e-09;1!UBERON:0003663;1.61e-09;1!UBERON:0004256;1.61e-09;1!UBERON:0004708;1.61e-09;1!UBERON:0002101;1.61e-09;1!UBERON:0004709;1.61e-09;1!UBERON:0006518;1.61e-09;1!UBERON:0008949;1.61e-09;1!UBERON:0002529;1.61e-09;1!UBERON:0010538;1.61e-09;1!UBERON:0003661;1.61e-09;1!UBERON:0010890;1.61e-09;1!UBERON:0002471;1.61e-09;1!UBERON:0001383;1.61e-09;1!UBERON:0000101;1.61e-09;1!UBERON:0010758;1.61e-09;1!UBERON:0010707;1.61e-09;1!UBERON:0000978;1.61e-09;1!UBERON:0002103;1.61e-09;1!UBERON:0001665;1.61e-09;1!UBERON:0003823;1.61e-09;1!UBERON:0000154;1.61e-09;1!UBERON:0010709;1.61e-09;1!UBERON:0002167;1.61e-09;1!UBERON:0001135;2.68e-09;15!UBERON:0001155;4.31e-09;9!UBERON:0000059;1.60e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,1.05e-16,64;UBERON:0001015,1.05e-16,64;UBERON:0000383,1.05e-16,64;UBERON:0001134,1.97e-14,62;UBERON:0002036,1.97e-14,62;UBERON:0003082,1.97e-14,62;UBERON:0004151,1.29e-12,3;UBERON:0002329,2.25e-12,71;UBERON:0003059,2.25e-12,71;UBERON:0007282,2.25e-12,71;UBERON:0004290,2.25e-12,71;UBERON:0009618,2.25e-12,71;UBERON:0001723,2.85e-12,3;UBERON:0001033,2.85e-12,3;UBERON:0010056,2.85e-12,3;UBERON:0003077,3.54e-12,72;UBERON:0007285,3.54e-12,72;UBERON:0007524,5.50e-12,73;UBERON:0007503,4.21e-11,78;UBERON:0000486,2.52e-10,83;UBERON:0002084,3.74e-10,1;UBERON:0002082,3.74e-10,1;UBERON:0010226,3.74e-10,1;UBERON:0002079,4.87e-10,1;UBERON:0005418,1.06e-09,1;UBERON:0001389,1.06e-09,1;UBERON:0000026,1.06e-09,1;UBERON:0008784,1.06e-09,1;UBERON:0006058,1.06e-09,1;UBERON:0003663,1.06e-09,1;UBERON:0004256,1.06e-09,1;UBERON:0004708,1.06e-09,1;UBERON:0002101,1.06e-09,1;UBERON:0004709,1.06e-09,1;UBERON:0002529,1.06e-09,1;UBERON:0010538,1.06e-09,1;UBERON:0003661,1.06e-09,1;UBERON:0010890,1.06e-09,1;UBERON:0002471,1.06e-09,1;UBERON:0001383,1.06e-09,1;UBERON:0004357,1.06e-09,1;UBERON:0004347,1.06e-09,1;UBERON:0005420,1.06e-09,1;UBERON:0005732,1.06e-09,1;UBERON:0010758,1.06e-09,1;UBERON:0010707,1.06e-09,1;UBERON:0000978,1.06e-09,1;UBERON:0002103,1.06e-09,1;UBERON:0001665,1.06e-09,1;UBERON:0003823,1.06e-09,1;UBERON:0000154,1.06e-09,1;UBERON:0010709,1.06e-09,1;UBERON:0005733,1.06e-09,1;UBERON:0005730,1.06e-09,1;UBERON:0002171,1.48e-09,1;UBERON:0006518,1.48e-09,1;UBERON:0008949,1.48e-09,1;UBERON:0000101,1.48e-09,1;UBERON:0002167,1.48e-09,1;UBERON:0001135,3.05e-09,15;UBERON:0001155,4.95e-09,9;UBERON:0000059,1.79e-07,11 | |||
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|short_description=p@chr1:78401534..78401545,+ | |||
}} | }} |
Latest revision as of 10:28, 28 July 2015
Short description: | p@chr1:78401534..78401545, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:78401534..78401545, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 5.75e-26 | 3 |
smooth muscle cell of large intestine | 5.75e-26 | 3 |
smooth muscle cell of colon | 5.75e-26 | 3 |
skeletal muscle satellite cell | 6.54e-25 | 3 |
astrocyte of the cerebral cortex | 6.96e-12 | 3 |
muscle precursor cell | 2.88e-10 | 58 |
myoblast | 2.88e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.88e-10 | 58 |
skeletal muscle myoblast | 2.57e-09 | 4 |
cell of skeletal muscle | 1.09e-08 | 9 |