FFCP PHASE1:Hg19::chr20:35176518..35176542,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:35176518..35176542,+ | |||
|coexpression_cluster_id=C384 | |||
|description=CAGE_peak_at_chr20:35176518..35176542,+ | |description=CAGE_peak_at_chr20:35176518..35176542,+ | ||
|id=chr20:35176518..35176542,+ | |id=chr20:35176518..35176542,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.61e-21!180;CL:0000057!6.24e-14!75;CL:0000680!9.71e-12!57;CL:0000056!9.71e-12!57;CL:0000355!9.71e-12!57;CL:0000183!1.10e-11!59;CL:0000192!2.90e-11!42;CL:0000514!2.90e-11!42;CL:0000187!3.93e-11!54;CL:0000393!1.23e-09!60;CL:0000211!1.23e-09!60;CL:0000359!1.53e-08!32;CL:0000222!1.48e-07!119;CL:0000136!4.58e-07!15 | |ontology_enrichment_celltype=CL:0000055!1.61e-21!180;CL:0000057!6.24e-14!75;CL:0000680!9.71e-12!57;CL:0000056!9.71e-12!57;CL:0000355!9.71e-12!57;CL:0000183!1.10e-11!59;CL:0000192!2.90e-11!42;CL:0000514!2.90e-11!42;CL:0000187!3.93e-11!54;CL:0000393!1.23e-09!60;CL:0000211!1.23e-09!60;CL:0000359!1.53e-08!32;CL:0000222!1.48e-07!119;CL:0000136!4.58e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000134;9.70e-09;55!CL:0000192;1.02e-08;43!CL:0000359;3.56e-08;32!CL:0000048;1.07e-07;58!CL:0000723;4.51e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.45e-12,43;CL:0000514,3.45e-12,43;CL:0000057,3.84e-11,76;CL:0000680,1.43e-10,58;CL:0000056,1.43e-10,58;CL:0000355,1.43e-10,58;CL:0000187,7.49e-10,55;CL:0000359,1.35e-08,32;CL:0000393,2.74e-08,61;CL:0000211,2.74e-08,61;CL:0000136,5.31e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.02e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;3.03e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.19e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!4.97e-16!143;UBERON:0000914!1.56e-15!83;UBERON:0002329!1.56e-15!83;UBERON:0003077!1.56e-15!83;UBERON:0003059!1.56e-15!83;UBERON:0007282!1.56e-15!83;UBERON:0009618!1.56e-15!83;UBERON:0007285!1.56e-15!83;UBERON:0004290!5.32e-14!70;UBERON:0002385!2.56e-13!63;UBERON:0001015!2.56e-13!63;UBERON:0000383!2.56e-13!63;UBERON:0000486!1.16e-12!82;UBERON:0001134!2.35e-12!61;UBERON:0002036!2.35e-12!61;UBERON:0003082!2.35e-12!61;UBERON:0002100!8.62e-12!216;UBERON:0003104!7.06e-11!238;UBERON:0009142!7.06e-11!238;UBERON:0000481!1.67e-10!347;UBERON:0000468!3.96e-10!659;UBERON:0004872!6.25e-10!84;UBERON:0001009!1.83e-09!113;UBERON:0004535!1.30e-08!110;UBERON:0000926!2.30e-08!448;UBERON:0004120!2.30e-08!448;UBERON:0006603!2.30e-08!448;UBERON:0000475!7.16e-08!365;UBERON:0007100!9.25e-08!27;UBERON:0003914!9.75e-08!118;UBERON:0002049!2.60e-07!79;UBERON:0007798!2.60e-07!79;UBERON:0000480!3.27e-07!626;UBERON:0000467!3.32e-07!625;UBERON:0000490!5.66e-07!138;UBERON:0001981!9.42e-07!60;UBERON:0007500!9.42e-07!60;UBERON:0004537!9.42e-07!60;UBERON:0006965!9.42e-07!60 | |ontology_enrichment_uberon=UBERON:0005256!4.97e-16!143;UBERON:0000914!1.56e-15!83;UBERON:0002329!1.56e-15!83;UBERON:0003077!1.56e-15!83;UBERON:0003059!1.56e-15!83;UBERON:0007282!1.56e-15!83;UBERON:0009618!1.56e-15!83;UBERON:0007285!1.56e-15!83;UBERON:0004290!5.32e-14!70;UBERON:0002385!2.56e-13!63;UBERON:0001015!2.56e-13!63;UBERON:0000383!2.56e-13!63;UBERON:0000486!1.16e-12!82;UBERON:0001134!2.35e-12!61;UBERON:0002036!2.35e-12!61;UBERON:0003082!2.35e-12!61;UBERON:0002100!8.62e-12!216;UBERON:0003104!7.06e-11!238;UBERON:0009142!7.06e-11!238;UBERON:0000481!1.67e-10!347;UBERON:0000468!3.96e-10!659;UBERON:0004872!6.25e-10!84;UBERON:0001009!1.83e-09!113;UBERON:0004535!1.30e-08!110;UBERON:0000926!2.30e-08!448;UBERON:0004120!2.30e-08!448;UBERON:0006603!2.30e-08!448;UBERON:0000475!7.16e-08!365;UBERON:0007100!9.25e-08!27;UBERON:0003914!9.75e-08!118;UBERON:0002049!2.60e-07!79;UBERON:0007798!2.60e-07!79;UBERON:0000480!3.27e-07!626;UBERON:0000467!3.32e-07!625;UBERON:0000490!5.66e-07!138;UBERON:0001981!9.42e-07!60;UBERON:0007500!9.42e-07!60;UBERON:0004537!9.42e-07!60;UBERON:0006965!9.42e-07!60 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.29e-08;25!UBERON:0001013;4.61e-07;14 | |||
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| ||
|short_description=p@chr20:35176518..35176542,+ | |short_description=p@chr20:35176518..35176542,+ | ||
}} | }} |
Latest revision as of 13:36, 28 July 2015
Short description: | p@chr20:35176518..35176542, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35176518..35176542, + |
Coexpression cluster: | C384_Adipocyte_smooth_bladder_left_aorta_Osteoblast_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.45e-12 | 43 |
smooth muscle myoblast | 3.45e-12 | 43 |
fibroblast | 3.84e-11 | 76 |
muscle precursor cell | 1.43e-10 | 58 |
myoblast | 1.43e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.43e-10 | 58 |
muscle cell | 7.49e-10 | 55 |
vascular associated smooth muscle cell | 1.35e-08 | 32 |
electrically responsive cell | 2.74e-08 | 61 |
electrically active cell | 2.74e-08 | 61 |
fat cell | 5.31e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 2.32e-14 | 160 |
entire embryonic mesenchyme | 2.32e-14 | 160 |
trunk mesenchyme | 5.22e-14 | 122 |
epithelial vesicle | 1.58e-12 | 78 |
dense mesenchyme tissue | 3.81e-12 | 73 |
somite | 4.85e-12 | 71 |
presomitic mesoderm | 4.85e-12 | 71 |
presumptive segmental plate | 4.85e-12 | 71 |
dermomyotome | 4.85e-12 | 71 |
trunk paraxial mesoderm | 4.85e-12 | 71 |
muscle tissue | 5.51e-12 | 64 |
musculature | 5.51e-12 | 64 |
musculature of body | 5.51e-12 | 64 |
paraxial mesoderm | 1.20e-11 | 72 |
presumptive paraxial mesoderm | 1.20e-11 | 72 |
skeletal muscle tissue | 6.35e-11 | 62 |
striated muscle tissue | 6.35e-11 | 62 |
myotome | 6.35e-11 | 62 |
mesoderm | 7.04e-11 | 315 |
mesoderm-derived structure | 7.04e-11 | 315 |
presumptive mesoderm | 7.04e-11 | 315 |
multilaminar epithelium | 9.44e-10 | 83 |
trunk | 4.57e-09 | 199 |
splanchnic layer of lateral plate mesoderm | 2.77e-07 | 83 |
adipose tissue | 4.46e-07 | 14 |
circulatory system | 5.34e-07 | 112 |
primary circulatory organ | 7.36e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.19e-07 | 14 |