FFCP PHASE1:Hg19::chr20:35177709..35177724,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:35177709..35177724,+ to FFCP PHASE1:Hg19::chr20:35177709..35177724,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:35177709..35177724,+ | |||
|coexpression_cluster_id=C384 | |||
|description=CAGE_peak_at_chr20:35177709..35177724,+ | |||
|id=chr20:35177709..35177724,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.97e-12!180;CL:0000136!1.69e-11!15;CL:0000057!3.81e-10!75;CL:0000680!7.80e-07!57;CL:0000056!7.80e-07!57;CL:0000355!7.80e-07!57;CL:0000183!9.49e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.50e-15;13!CL:0002559;9.32e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.35e-17,15;CL:0002559,2.89e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!2.79e-09!216;UBERON:0005256!1.35e-08!143;UBERON:0003104!3.12e-07!238;UBERON:0009142!3.12e-07!238;UBERON:0002385!6.10e-07!63;UBERON:0001015!6.10e-07!63;UBERON:0000383!6.10e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.71e-08;6!UBERON:0002358;3.71e-08;6!UBERON:0003684;3.71e-08;6!UBERON:0001178;3.71e-08;6!UBERON:0002073;9.32e-08;5!UBERON:0005904;1.35e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,2.89e-08,5;UBERON:0005086,2.89e-08,5;UBERON:0003688,3.29e-08,6;UBERON:0002358,3.29e-08,6;UBERON:0003684,3.29e-08,6;UBERON:0001178,3.29e-08,6;UBERON:0005904,9.50e-08,4 | |||
|phase1_expression=4.1786027232228,3.63970890614671,2.53717927372748,7.00513088471913,4.46961094427288,5.23403114460221,10.1319951267324,0.631719873426831,0.783556884599516,0.982935746006035,4.18680700783456,0,0.263766978228454,0.247532705920093,0,2.01697543935533,1.20538905604795,1.46062018077475,0,0.246242116153576,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,1.0843174571537,0.50133791063589,0.289693037921647,0,0.486634870302636,0.472674085820339,1.10864698731282,0.43917392846563,0.261958150995425,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0.225222960966644,0,0,0,0,0,0,3.47880366186723,0.633152558322899,0.264818361626438,1.14734648299525,0.354668382198357,2.80338800071154,1.06748995729705,0.74000264525148,0,0.134710672069688,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.206651562351531,1.18800285728205,1.48360157567134,1.82032272387605,2.15585442544872,0,0,0,1.31693286264251,3.37136575378922,1.20190447125277,0.567160915800105,0,0.213557388818567,1.69545520927649,0.300091096084402,0.412210116953756,0,2.97786970130544,0,0.68205903612839,0.252433774244115,1.56484827691909,0.161646056818812,1.77504796258307,2.11579406278045,1.18692414617341,0.193260853163297,0,0.286804595389004,0,0.132529768321485,0,0.207322110030741,0.504641701751257,0,1.56449532329816,1.92972281457866,1.38134921352481,1.85747171212792,2.16563844500876,0,0.337169380156203,0,0,0.217879444092406,0,0.269662616320329,0,0,0,1.40241773803446,0.4115740113314,2.94017422771084,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,1.03417372606222,3.57656445851882,0,2.92531928243358,3.12022310734098,0,0,0,0.857867961948885,1.62786481617433,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,0.301439377059586,3.48613383440118,0.399891964728228,0,0,0,1.4377491329495,2.29723871668228,0,1.01346914667305,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,2.07970861530807,2.3195768543631,1.41932173530541,1.17141414992713,0.902838299183157,2.27407504055985,4.1389228517002,0,0.184369168541703,0.781952530212746,0.587403472388222,0,0,0,0,0,0,0,2.48107807818777,0.767309866440312,3.64858122762996,0.896974044789907,4.09365799253363,2.89537058058494,1.48418066444991,0.154209693802656,0.355123450626254,0.246381468041427,0,0.232420756919918,0.120859449591622,0.802025881213139,0,1.14814448164607,0.910455840033585,1.31124414959424,0,0.15403067420883,0.784349769176855,0,0.105551628892876,1.13733384070897,0,0.431831832204279,0,0.541892875087706,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0.650756789328606,0.103041011647722,0.183138929636687,0,0,0,3.21367859688319,0.096670718292122,0.154048617114644,0.15350367472613,0.275673144969061,0,0.435050081742686,0.0852266274161009,0.534192213880424,0.165284915360978,0.192190067365106,0,0,2.32422774648643,0,0,0,1.59691809095107,0,0.55597265731176,0.572499546967965,0.372158369359667,1.58189712359363,1.33441135746677,0.511795582622668,0,0,1.56989728039846,0.899362287916574,0.274537029736055,0.235624804691373,0.404364963146632,1.58510321173008,0,0.48763373908959,0,0,0.545999645631943,0.848432591722276,0,0.551365343546124,0,1.75380354101505,0.578775534266688,0,1.82619339266434,1.239293992399,0.563391205064483,0,0.982490410131212,1.07001315444375,1.06428319221179,0.211107635297664,0,0,0.349934720244983,0,0,0,0.376575203107117,0.43050537267123,0,0,0.459446800413919,0.507447609232169,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,1.09224469574562,0,0,0,0,0,0,0,0.222617410045812,0,0,3.18796781201712,1.65770349318689,0,0,0,4.3545542272653,0,0,0,6.90503839458535,0,2.22273980289274,0,0,0,0,0,1.44999915086959,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0.87754158861589,0,0,1.84680620409113,0.683652335082007,0,0.0897576444097721,0,0,1.37396390102793,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0.995261931078505,3.18447232212021,1.22206028986725,0,0,0,0,0,0,0,0,0,1.57833761139756,1.20990716048664,0,0.568679216656392,0,0,0,0.661983911750998,0,0,0,0,0,0.0979923974143777,0,3.31980669659857,0.687944129886466,0,0,0,4.84945082442097,0,0.451961481561065,0,0,0,0,0,2.77488893161158,0,0,0.229073192331831,0,0,0.248505071130865,0,0,0,0,0,0,0,0,1.71906176567983,0,0.837847203816763,1.60412296808179,0.717873024576814,0.199679000498991,1.28767814440971,1.33902874465124,1.14211903227435,2.52209918479682,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.157363764404994,0,0,0.191915197319445,2.85878130549347,1.98627591109629,0.5085370753095,1.62899880526114,3.45688596480507,0.979762080328227,0,0,0.511164065356265,0,0,0,0,0,0,0,0.320362237703084,0.314408610199332,0.828478110694391,0,0,0,0,1.08803560673895,1.5041393641362,2.14441903734423,1.31149052283922,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0.754703705257725,0,0.457680136793847,0.302461847526478,0,0.591420599958536,0.318593534327405,0,0.310525913752519,0,1.32920857278997,0.521745061811734,0.300515217994437,1.52322084867518,0.813741466409323,0.545545977607678,0.107410557042488,0.928067519756987,0.796191777397232,0.800055529326307,1.37358282073117,1.01024846629776,0,0,0,0.521988583930423,0,0.231522474323834,0.489473409012935,0.179088841081487,0.617602894321944,0,0.176689145945881,0,0.168942440653073,0,0.690860683462397,0,0,0,0.265729680626726,0,5.2417575815426,0.245772908753719,0,0,0,0.172214979660816,1.13503190713367,0.184105950251841,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,1.05802783107205,1.8374728641192,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0.762764190934334,0,0.198916222116275,1.65462722368366,1.21023041222112,0,0,0,0,0,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0.0679697329768317,0,0.118193840883968,0,1.72684804271131,0,0,0,0,0,0.78624198594322,0,0,0,1.60342272946051,0,0.3414369541879,0,0,0,0,2.9637093513365,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,1.08043821351123,0.218559560503957,0,4.6578181133242,0,0,0,0.4226557275834,2.0391253762538,0.0939839179798536,0.128915775947154,0,0,0,0,2.92134555298607,0.458729283404541,0,0,0,0,2.1161073620616,0.743990036333503,0.462175628631418,0.432626562123789,0,0,0.506794004045748,0.305966489225945,0,0,0,1.74291005901951,0,0,0,0.639701945702943,0,0,0,0.112131862580613,0.572824424503484,0,1.08858373948481,0,0.0673520530145875,0.573777643141411,0.99798106963804,0,0.106727345877715,5.7921684686082,0.0898252021065869,2.34640942403454,2.07810455110873,0.813792356631477,0,1.20764276154616,0 | |phase1_expression=4.1786027232228,3.63970890614671,2.53717927372748,7.00513088471913,4.46961094427288,5.23403114460221,10.1319951267324,0.631719873426831,0.783556884599516,0.982935746006035,4.18680700783456,0,0.263766978228454,0.247532705920093,0,2.01697543935533,1.20538905604795,1.46062018077475,0,0.246242116153576,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,1.0843174571537,0.50133791063589,0.289693037921647,0,0.486634870302636,0.472674085820339,1.10864698731282,0.43917392846563,0.261958150995425,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0.225222960966644,0,0,0,0,0,0,3.47880366186723,0.633152558322899,0.264818361626438,1.14734648299525,0.354668382198357,2.80338800071154,1.06748995729705,0.74000264525148,0,0.134710672069688,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.206651562351531,1.18800285728205,1.48360157567134,1.82032272387605,2.15585442544872,0,0,0,1.31693286264251,3.37136575378922,1.20190447125277,0.567160915800105,0,0.213557388818567,1.69545520927649,0.300091096084402,0.412210116953756,0,2.97786970130544,0,0.68205903612839,0.252433774244115,1.56484827691909,0.161646056818812,1.77504796258307,2.11579406278045,1.18692414617341,0.193260853163297,0,0.286804595389004,0,0.132529768321485,0,0.207322110030741,0.504641701751257,0,1.56449532329816,1.92972281457866,1.38134921352481,1.85747171212792,2.16563844500876,0,0.337169380156203,0,0,0.217879444092406,0,0.269662616320329,0,0,0,1.40241773803446,0.4115740113314,2.94017422771084,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,1.03417372606222,3.57656445851882,0,2.92531928243358,3.12022310734098,0,0,0,0.857867961948885,1.62786481617433,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,0.301439377059586,3.48613383440118,0.399891964728228,0,0,0,1.4377491329495,2.29723871668228,0,1.01346914667305,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,2.07970861530807,2.3195768543631,1.41932173530541,1.17141414992713,0.902838299183157,2.27407504055985,4.1389228517002,0,0.184369168541703,0.781952530212746,0.587403472388222,0,0,0,0,0,0,0,2.48107807818777,0.767309866440312,3.64858122762996,0.896974044789907,4.09365799253363,2.89537058058494,1.48418066444991,0.154209693802656,0.355123450626254,0.246381468041427,0,0.232420756919918,0.120859449591622,0.802025881213139,0,1.14814448164607,0.910455840033585,1.31124414959424,0,0.15403067420883,0.784349769176855,0,0.105551628892876,1.13733384070897,0,0.431831832204279,0,0.541892875087706,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0.650756789328606,0.103041011647722,0.183138929636687,0,0,0,3.21367859688319,0.096670718292122,0.154048617114644,0.15350367472613,0.275673144969061,0,0.435050081742686,0.0852266274161009,0.534192213880424,0.165284915360978,0.192190067365106,0,0,2.32422774648643,0,0,0,1.59691809095107,0,0.55597265731176,0.572499546967965,0.372158369359667,1.58189712359363,1.33441135746677,0.511795582622668,0,0,1.56989728039846,0.899362287916574,0.274537029736055,0.235624804691373,0.404364963146632,1.58510321173008,0,0.48763373908959,0,0,0.545999645631943,0.848432591722276,0,0.551365343546124,0,1.75380354101505,0.578775534266688,0,1.82619339266434,1.239293992399,0.563391205064483,0,0.982490410131212,1.07001315444375,1.06428319221179,0.211107635297664,0,0,0.349934720244983,0,0,0,0.376575203107117,0.43050537267123,0,0,0.459446800413919,0.507447609232169,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,1.09224469574562,0,0,0,0,0,0,0,0.222617410045812,0,0,3.18796781201712,1.65770349318689,0,0,0,4.3545542272653,0,0,0,6.90503839458535,0,2.22273980289274,0,0,0,0,0,1.44999915086959,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0.87754158861589,0,0,1.84680620409113,0.683652335082007,0,0.0897576444097721,0,0,1.37396390102793,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0.995261931078505,3.18447232212021,1.22206028986725,0,0,0,0,0,0,0,0,0,1.57833761139756,1.20990716048664,0,0.568679216656392,0,0,0,0.661983911750998,0,0,0,0,0,0.0979923974143777,0,3.31980669659857,0.687944129886466,0,0,0,4.84945082442097,0,0.451961481561065,0,0,0,0,0,2.77488893161158,0,0,0.229073192331831,0,0,0.248505071130865,0,0,0,0,0,0,0,0,1.71906176567983,0,0.837847203816763,1.60412296808179,0.717873024576814,0.199679000498991,1.28767814440971,1.33902874465124,1.14211903227435,2.52209918479682,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.157363764404994,0,0,0.191915197319445,2.85878130549347,1.98627591109629,0.5085370753095,1.62899880526114,3.45688596480507,0.979762080328227,0,0,0.511164065356265,0,0,0,0,0,0,0,0.320362237703084,0.314408610199332,0.828478110694391,0,0,0,0,1.08803560673895,1.5041393641362,2.14441903734423,1.31149052283922,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0.754703705257725,0,0.457680136793847,0.302461847526478,0,0.591420599958536,0.318593534327405,0,0.310525913752519,0,1.32920857278997,0.521745061811734,0.300515217994437,1.52322084867518,0.813741466409323,0.545545977607678,0.107410557042488,0.928067519756987,0.796191777397232,0.800055529326307,1.37358282073117,1.01024846629776,0,0,0,0.521988583930423,0,0.231522474323834,0.489473409012935,0.179088841081487,0.617602894321944,0,0.176689145945881,0,0.168942440653073,0,0.690860683462397,0,0,0,0.265729680626726,0,5.2417575815426,0.245772908753719,0,0,0,0.172214979660816,1.13503190713367,0.184105950251841,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,1.05802783107205,1.8374728641192,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0.762764190934334,0,0.198916222116275,1.65462722368366,1.21023041222112,0,0,0,0,0,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0.0679697329768317,0,0.118193840883968,0,1.72684804271131,0,0,0,0,0,0.78624198594322,0,0,0,1.60342272946051,0,0.3414369541879,0,0,0,0,2.9637093513365,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,1.08043821351123,0.218559560503957,0,4.6578181133242,0,0,0,0.4226557275834,2.0391253762538,0.0939839179798536,0.128915775947154,0,0,0,0,2.92134555298607,0.458729283404541,0,0,0,0,2.1161073620616,0.743990036333503,0.462175628631418,0.432626562123789,0,0,0.506794004045748,0.305966489225945,0,0,0,1.74291005901951,0,0,0,0.639701945702943,0,0,0,0.112131862580613,0.572824424503484,0,1.08858373948481,0,0.0673520530145875,0.573777643141411,0.99798106963804,0,0.106727345877715,5.7921684686082,0.0898252021065869,2.34640942403454,2.07810455110873,0.813792356631477,0,1.20764276154616,0 | ||
|short_description=p@chr20:35177709..35177724,+ | |||
}} | }} |
Latest revision as of 13:36, 28 July 2015
Short description: | p@chr20:35177709..35177724, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35177709..35177724, + |
Coexpression cluster: | C384_Adipocyte_smooth_bladder_left_aorta_Osteoblast_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.35e-17 | 15 |
hair follicle cell | 2.89e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 2.89e-08 | 5 |
hair follicle placode | 2.89e-08 | 5 |
omentum | 3.29e-08 | 6 |
peritoneum | 3.29e-08 | 6 |
abdominal cavity | 3.29e-08 | 6 |
visceral peritoneum | 3.29e-08 | 6 |
duct of male reproductive system | 9.50e-08 | 4 |