FFCP PHASE1:Hg19::chr20:35177969..35177986,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:35177969..35177986,+ to FFCP PHASE1:Hg19::chr20:35177969..35177986,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:35177969..35177986,+ | |||
|coexpression_cluster_id=C384 | |||
|description=CAGE_peak_at_chr20:35177969..35177986,+ | |||
|id=chr20:35177969..35177986,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.28e-14!180;CL:0000057!4.89e-10!75;CL:0000192!6.49e-10!42;CL:0000514!6.49e-10!42;CL:0000183!1.61e-09!59;CL:0000680!3.08e-09!57;CL:0000056!3.08e-09!57;CL:0000355!3.08e-09!57;CL:0000187!1.21e-08!54;CL:0000136!8.31e-08!15;CL:0000393!1.23e-07!60;CL:0000211!1.23e-07!60;CL:0000359!2.35e-07!32;CL:0002334!3.28e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.31e-08;12!CL:0000359;5.57e-07;32!CL:0000192;5.84e-07;43!CL:0002559;8.73e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,5.94e-09,43;CL:0000514,5.94e-09,43;CL:0002334,6.05e-09,12;CL:0000057,2.67e-08,76;CL:0000136,1.02e-07,15;CL:0000359,2.93e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;5.84e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.52e-10!83;UBERON:0002329!4.52e-10!83;UBERON:0003077!4.52e-10!83;UBERON:0003059!4.52e-10!83;UBERON:0007282!4.52e-10!83;UBERON:0009618!4.52e-10!83;UBERON:0007285!4.52e-10!83;UBERON:0002385!9.83e-10!63;UBERON:0001015!9.83e-10!63;UBERON:0000383!9.83e-10!63;UBERON:0004290!3.47e-09!70;UBERON:0001134!5.66e-09!61;UBERON:0002036!5.66e-09!61;UBERON:0003082!5.66e-09!61;UBERON:0005256!5.76e-09!143;UBERON:0000486!5.92e-08!82;UBERON:0002100!9.30e-08!216;UBERON:0000926!1.25e-07!448;UBERON:0004120!1.25e-07!448;UBERON:0006603!1.25e-07!448;UBERON:0004872!1.90e-07!84;UBERON:0000468!1.97e-07!659;UBERON:0001009!2.63e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.30e-08;6!UBERON:0002358;4.30e-08;6!UBERON:0003684;4.30e-08;6!UBERON:0001178;4.30e-08;6!UBERON:0002073;8.73e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.37e-08,6;UBERON:0002358,2.37e-08,6;UBERON:0003684,2.37e-08,6;UBERON:0001178,2.37e-08,6;UBERON:0000926,3.61e-08,315;UBERON:0004120,3.61e-08,315;UBERON:0006603,3.61e-08,315;UBERON:0001637,1.66e-07,42;UBERON:0003509,1.66e-07,42;UBERON:0004572,1.66e-07,42;UBERON:0005256,6.45e-07,122 | |||
|phase1_expression=3.45188920614058,10.4909256706582,1.69145284915165,13.009528785907,9.83314407740033,9.59572376510406,10.1319951267324,0.631719873426831,0.522371256399677,0.737201809504527,4.18680700783456,0,0.791300934685361,0,0.331397375727916,2.6893005858071,3.61616716814386,5.84248072309899,0,0,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,1.00267582127178,0.579386075843295,0,0,0.0945348171640679,1.33037638477538,0.527008714158756,0.196468613246569,0,0,0,0.174129737299267,0.664789802594326,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0.732186172644509,0,2.43042584364528,0.0892997282840798,0,0,0,0,0,0,0,0,1.98788780678127,1.01304409331664,0.397227542439656,1.14734648299525,1.41867352879343,2.24271040056923,3.20246987189115,5.18001851676036,0,0.404132016209064,0.326923806226917,0.151357427644931,0,0,0.312160076830321,0,0.896692083310806,0,0,0,0,0.122834317311768,0,0,3.70900393917835,0,4.31170885089743,0,0.250237039743928,0.277064115484183,0,8.27517048657353,4.35690370829131,0.453728732640084,0.179389635688862,0.427114777637135,1.27159140695737,0.300091096084402,1.03052529238439,1.03056216018252,1.67505170698431,0.168776332241266,0.974370051611986,0.757301322732344,1.28869858099219,0.161646056818812,1.42003837006646,2.11579406278045,1.01736355386293,0,0,0.573609190778008,0.243947412259191,0,0,0.207322110030741,0.252320850875628,0.36497735907583,3.12899064659632,7.07565032012174,1.38134921352481,2.3218396401599,2.16563844500876,0.473227200159376,0.674338760312407,0.241011029883482,0.441175890929576,0.217879444092406,0.949082476444386,0.269662616320329,0.392442930250692,0.769494313892781,0,2.80483547606892,0.4115740113314,5.88034845542168,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0.0925884451585296,0,2.07986957055916,1.44331342025273,0,0.352226082707465,0,0.462985512576611,0,0,0,0,0.234004265139238,0.148631162288728,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0.87192013766656,0.1466765716419,0.129271715757778,0,0,1.86156681609409,7.28052058379563,0.257207374262142,0,0.532844358032199,0,0,1.64648067356154,0,0,0,0.301439377059586,2.61460037580088,3.59902768255405,0,0,0,1.91699884393266,1.14861935834114,0,0.723906533337896,0.821905290201534,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0,8.52680532276309,12.6684582045985,5.04647728108591,1.99140405487612,0.902838299183157,15.9185252839189,3.10419213877515,0,0.737476674166813,1.21637060255316,0.783204629850962,1.37257369524342,0,0,0,0,0,0.30239029332968,0.992431231275107,1.38115775959256,4.77122160536225,1.92208723883551,3.07024349440022,3.21707842287215,1.48418066444991,1.69630663182921,1.77561725313127,0.0821271560138091,3.11552657510173,2.67283870457906,0,0.601519410909855,0,0.459257792658427,2.54927635209404,4.327105693661,0,0,0.784349769176855,0,0,0,0,0.215915916102139,0,0.541892875087706,2.50844886927427,0,0,0,0,0,0,0,0,0.618246069886334,0.27470839445503,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.614014698904518,0.137836572484531,0,0.435050081742686,0.170453254832202,0.267096106940212,0.495854746082934,0.576570202095319,0,0,4.64845549297286,0.31481234683064,0,0,1.06461206063404,0,0.37064843820784,1.5743737541619,0.372158369359667,0.632758849437452,3.0500831027812,1.27948895655667,0.42793898803392,0,2.35484592059769,0.359744915166629,2.47083326762449,0.824686816419805,0.606547444719948,1.58510321173008,0.842516912477962,0.48763373908959,1.46228093778771,2.11300293513511,1.09199929126389,2.40389234321312,0,0,1.99031692572366,4.38450885253763,0,1.31178950409327,1.42037263873893,2.16876448669825,1.97186921772569,0.430234056612155,0.589494246078727,2.49669736036875,1.41904425628239,0.844430541190656,1.64647446479951,0,0.699869440489966,0,0,0,0.282431402330337,0,0,0.443430153536676,0,0.507447609232169,0,1.13929437434833,0.238231775457789,0,0,0,1.58625035258854,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,0.586032717087576,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0,0,5.97743964753209,2.76283915531148,0,0,0,6.84287092855976,0,0,0,4.24166644238815,4.7896618469388,1.11136990144637,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0,0,1.09692698576986,0,0,0.615602068030377,0.341826167541004,0,0,0,0.31900115973192,1.19076871422421,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,7.96209544862804,2.0345239835768,12.8316330436061,0,0,0,0,0,0,0,0,0.242780379534093,3.55125962564451,2.41981432097328,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,11.531960103974,0.171986032471617,0,0,0.0821154570532092,2.42472541221049,0,2.71176888936639,0.27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| ||
|short_description=p@chr20:35177969..35177986,+ | |||
}} | }} |
Latest revision as of 13:36, 28 July 2015
Short description: | p@chr20:35177969..35177986, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35177969..35177986, + |
Coexpression cluster: | C384_Adipocyte_smooth_bladder_left_aorta_Osteoblast_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 5.94e-09 | 43 |
smooth muscle myoblast | 5.94e-09 | 43 |
preadipocyte | 6.05e-09 | 12 |
fibroblast | 2.67e-08 | 76 |
fat cell | 1.02e-07 | 15 |
vascular associated smooth muscle cell | 2.93e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.37e-08 | 6 |
peritoneum | 2.37e-08 | 6 |
abdominal cavity | 2.37e-08 | 6 |
visceral peritoneum | 2.37e-08 | 6 |
mesoderm | 3.61e-08 | 315 |
mesoderm-derived structure | 3.61e-08 | 315 |
presumptive mesoderm | 3.61e-08 | 315 |
artery | 1.66e-07 | 42 |
arterial blood vessel | 1.66e-07 | 42 |
arterial system | 1.66e-07 | 42 |
trunk mesenchyme | 6.45e-07 | 122 |