FFCP PHASE1:Hg19::chr20:36784443..36784469,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr20:36784443..36784469,- to FFCP PHASE1:Hg19::chr20:36784443..36784469,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:36784443..36784469,- | |||
|coexpression_cluster_id=C454 | |||
|description=CAGE_peak_at_chr20:36784443..36784469,- | |||
|id=chr20:36784443..36784469,- | |||
|ontology_enrichment_celltype=CL:0000192!1.13e-07!42;CL:0000514!1.13e-07!42;CL:0000359!1.88e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.17e-19;19!CL:0002577;1.97e-11;3!CL:0002541;5.49e-11;3!CL:0002536;1.34e-07;2!CL:0002589;4.06e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.91e-20,19;CL:0002577,2.03e-11,3;CL:0002541,4.86e-11,3;CL:0002536,9.55e-08,2;CL:0002589,2.31e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.10e-16!118;UBERON:0002049!1.33e-15!79;UBERON:0007798!1.33e-15!79;UBERON:0004872!1.05e-14!84;UBERON:0000055!4.13e-14!69;UBERON:0001981!7.95e-13!60;UBERON:0007500!7.95e-13!60;UBERON:0004537!7.95e-13!60;UBERON:0006965!7.95e-13!60;UBERON:0005631!1.25e-11!14;UBERON:0000158!1.25e-11!14;UBERON:0001009!1.97e-11!113;UBERON:0004535!9.85e-11!110;UBERON:0000490!1.15e-10!138;UBERON:0000478!3.33e-10!24;UBERON:0000926!4.03e-09!448;UBERON:0004120!4.03e-09!448;UBERON:0006603!4.03e-09!448;UBERON:0001637!4.46e-09!42;UBERON:0003509!4.46e-09!42;UBERON:0004572!4.46e-09!42;UBERON:0002100!5.83e-09!216;UBERON:0004111!6.17e-09!241;UBERON:0000468!7.85e-09!659;UBERON:0005256!1.37e-08!143;UBERON:0000477!1.53e-08!286;UBERON:0004573!2.63e-08!33;UBERON:0004571!2.63e-08!33;UBERON:0003124!3.35e-08!7;UBERON:0000119!1.27e-07!312;UBERON:0000483!2.81e-07!309;UBERON:0000025!4.64e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;8.46e-16;10!UBERON:0000158;8.46e-16;10!UBERON:0000478;4.98e-15;24!UBERON:0003124;5.49e-11;3!UBERON:0000920;5.49e-11;3!UBERON:0001987;1.17e-08;4!UBERON:0000305;7.02e-08;7!UBERON:0001529;4.06e-07;2!UBERON:0007204;4.06e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.98e-23,14;UBERON:0000158,6.98e-23,14;UBERON:0003124,1.19e-17,7;UBERON:0000478,4.39e-15,24;UBERON:0000920,4.86e-11,3;UBERON:0001987,1.19e-08,4;UBERON:0004340,1.19e-08,4;UBERON:0000305,5.85e-08,7;UBERON:0001529,2.31e-07,2;UBERON:0007204,2.31e-07,2;UBERON:0004871,5.87e-07,8;UBERON:0004923,9.99e-07,66 | |||
|phase1_expression=0.726713517082227,0,0.704772020479856,1.0007329835313,0.446961094427288,1.74467704820074,2.53299878168311,0,0,0.245733936501509,1.39560233594486,1.52908960491121,3.69273769519835,0,0,0.672325146451775,1.80808358407193,0.730310090387373,0,0,1.63200552995402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.472674085820339,5.5432349365641,2.98638271356629,0.0654895377488563,0,0,0,0,1.06366368415092,0,0,0,0,0.860234595106124,0,0.56530794192401,0,0.550236083880135,0.835979866147242,1.29208379584664,0.71153252537342,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.803697554556718,0.44905874525234,0.900891843866578,0,0.949265659568129,2.19842092716489,0,0,0,0,1.01304409331664,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0.74000264525148,0,0.538842688278752,0.163461903113459,0.302714855289863,0,0,0.312160076830321,0,0,0,0,0,0,0,0.619954687054593,0,0.247266929278557,0,1.43723628363248,0,0,0,0,0,1.20190447125277,0,0,0,0,0,0,0.257640540045629,0,0.337552664482532,0.389748020644795,0,0.0920498986422993,0,0,0,0,0,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,2.76269842704961,0,0,0,0,0,0.110293972732394,0,0,0,0,0.38474715694639,1.4763109092493,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0,0.514703430895577,0.109750285408626,0,0,0,0,0,0,0,0.469634776943287,0.866198686566443,0,1.14152491340759,0,0,0,1.17002132569619,0.445893486866185,0.93733833986777,0.671928512795438,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0,0.517086863031111,0,0,2.92531928243358,2.08014873822732,0,0,0.266422179016099,1.42977993658148,2.17048642156577,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0.871533458600294,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.415941723061614,1.96271887676878,0,0.35142424497814,0.601892199455438,0,0,0,0.553107505625109,0.0868836144680828,0,0,0,0,0,3.03127571446259,6.65741758041988,4.5358543999452,0.744323423456331,0.306923946576125,1.40330047216537,0,0,0.160853921143607,0,0,0.355123450626254,0,0,0,0.483437798366489,0.802025881213139,0,0.229628896329213,0.546273504020151,0.786746489756545,0.451199612907412,0,0,0,0.105551628892876,0,0.510281115829547,0.215915916102139,4.62681758070868,0,0.501689773854853,0.509752546090077,0,0,0,0.522870902049801,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0.6970372701606,0.616067160352178,1.06461206063404,0,1.8532421910392,1.28812398067792,0,0,0.571890581771475,0,0,0.318203247925937,0,0.899362287916574,1.92175920815238,0.471249609382746,1.01091240786658,7.92551605865041,0.842516912477962,0,0.487426979262569,0,0.409499734223957,0.141405431953713,0,0,0.66343897524122,6.13831239355268,0,0,0.202910376962704,0.92947049429925,1.40847801266121,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0.753150406214233,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,2.27308917445131,0.71623345421307,0,0.307160702099232,0,0,1.66963057534359,0,0,0.796991953004279,0,0,0,0,0.622079175323615,1.16828856491525,0,0,0.690503839458535,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.227884111694002,0,0,0.217294743844016,2.23300811812344,2.83952539545773,2.66517388009317,0,0,0,0,0,0,0,0,1.68798451622422,0.489698424477443,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0.0821154570532092,0.193978032976839,0.0882561266915003,0.225980740780532,1.23337732182076,0.19871461170299,0,0,0.320635281006135,0.426905989478705,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0.998395002494955,1.28767814440971,0,0.268733889946905,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.0524545881349981,0,0,0,0,2.64836788146173,0,0.542999601753713,1.72844298240254,0.326587360109409,0,0,0.170388021785422,0.453248366080503,0.879313402068495,0,0,0.13223260174269,0.171086837884329,0,0.533937062838473,0.314408610199332,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,6.82270877124698,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.443565449968902,0.63718706865481,0,0.155262956876259,0,0,1.04349012362347,0,1.14241563650639,1.22061219961398,2.00033525122815,0.859284456339908,0,1.19428766609585,0,0,0.336749488765919,0,0.192619830407303,0,0.260994291965212,0,0,0,0,0,0,0.530067437837643,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0.2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| ||
|short_description=p@chr20:36784443..36784469,- | |||
}} | }} |
Latest revision as of 13:51, 28 July 2015
Short description: | p@chr20:36784443..36784469, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:36784443..36784469, - |
Coexpression cluster: | C454_Placental_Amniotic_Smooth_Mesenchymal_Lens_Renal_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.91e-20 | 19 |
placental epithelial cell | 2.03e-11 | 3 |
chorionic membrane mesenchymal stem cell | 4.86e-11 | 3 |
amniotic epithelial cell | 9.55e-08 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 2.31e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.98e-23 | 14 |
membranous layer | 6.98e-23 | 14 |
chorion | 1.19e-17 | 7 |
extraembryonic structure | 4.39e-15 | 24 |
egg chorion | 4.86e-11 | 3 |
placenta | 1.19e-08 | 4 |
allantois | 1.19e-08 | 4 |
amnion | 5.85e-08 | 7 |
brachiocephalic artery | 2.31e-07 | 2 |
brachiocephalic vasculature | 2.31e-07 | 2 |
somatic layer of lateral plate mesoderm | 5.87e-07 | 8 |
organ component layer | 9.99e-07 | 66 |