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FFCP PHASE1:Hg19::chr20:388935..388989,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=10616
|EntrezGene=entrezgene:10616
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=15864
|HGNC=HGNC:15864
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=A6PVK0,E9PFQ1,B4DML5,A6PVJ5
|UniProt=uniprot:A6PVK0,uniprot:E9PFQ1,uniprot:B4DML5,uniprot:A6PVJ5
|association_with_transcript=0bp_to_ENST00000382181,ENST00000400243,ENST00000400244,ENST00000400245,ENST00000400247_5end
|association_with_transcript=0bp_to_ENST00000382181,ENST00000400243,ENST00000400244,ENST00000400245,ENST00000400247_5end
|cluster_id=chr20:388935..388989,+
|description=CAGE_peak_1_at_RBCK1_5end
|description=CAGE_peak_1_at_RBCK1_5end
|id=chr20:388935..388989,+
|id=chr20:388935..388989,+

Revision as of 13:59, 28 July 2015

Short description:p1@RBCK1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_RBCK1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENST00000382181, ENST00000400243, ENST00000400244, ENST00000400245, ENST00000400247_5end
EntrezGene:10616
HGNC: 15864
UniProt: A6PVK0E9PFQ1B4DML5A6PVJ5
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data