FFCP PHASE1:Hg19::chr20:43726947..43726954,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:43726947..43726954,- | |||
|coexpression_cluster_id=C373 | |||
|description=CAGE_peak_at_chr20:43726947..43726954,- | |||
|id=chr20:43726947..43726954,- | |||
|ontology_enrichment_celltype=CL:0002598!5.15e-14!1;CL:0000306!2.21e-13!4;CL:0002222!2.21e-13!4;CL:0002224!2.21e-13!4;CL:0002535!9.87e-08!2;CL:0002536!1.12e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002535;3.52e-50;2!CL:0000746;5.04e-34;3!CL:0000737;6.30e-26;4!CL:0002494;1.49e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.52e-50,2;CL:0000746,4.27e-34,3;CL:0000513,4.27e-34,3;CL:0000737,5.56e-26,4;CL:0002494,1.45e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000513;5.04e-34;3 | |||
|ontology_enrichment_disease=DOID:178!6.65e-14!1;DOID:326!6.65e-14!1;DOID:3978!6.65e-14!1;DOID:3394!6.65e-14!1;DOID:5844!6.65e-14!1;DOID:114!1.36e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4362;4.66e-21;5!DOID:1749;1.93e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.15e-21,5;DOID:1749,2.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001896!2.95e-17!3;UBERON:0005290!2.95e-17!3;UBERON:0010096!2.95e-17!3;UBERON:0001882!7.55e-14!1;UBERON:0005403!7.55e-14!1;UBERON:0002022!2.07e-13!1;UBERON:0010077!2.21e-13!4;UBERON:0005389!2.21e-13!4;UBERON:0000484!2.21e-13!4;UBERON:0002546!2.21e-13!4;UBERON:0000965!2.21e-13!4;UBERON:0001803!2.21e-13!4;UBERON:0003073!2.21e-13!4;UBERON:0005426!2.21e-13!4;UBERON:0000064!2.41e-09!219;UBERON:0003075!2.88e-08!86;UBERON:0007284!2.88e-08!86;UBERON:0002346!7.24e-08!90;UBERON:0006955!9.87e-08!2;UBERON:0004801!9.87e-08!2;UBERON:0007023!1.21e-07!115;UBERON:0001049!2.53e-07!57;UBERON:0005068!2.53e-07!57;UBERON:0006241!2.53e-07!57;UBERON:0007135!2.53e-07!57;UBERON:0001871!3.56e-07!7;UBERON:0000076!3.90e-07!8;UBERON:0002616!4.56e-07!59;UBERON:0002298!4.84e-07!8;UBERON:0003056!7.34e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;3.52e-50;2!UBERON:0004801;3.52e-50;2!UBERON:0000002;8.34e-18;6!UBERON:0001560;8.34e-18;6!UBERON:0000995;3.48e-07;17!UBERON:0003975;7.39e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.52e-50,2;UBERON:0004801,4.52e-50,2;UBERON:0000002,9.07e-18,6;UBERON:0001560,9.07e-18,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,2.35059857767087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:43726947..43726954,- | |||
}} |
Latest revision as of 14:17, 28 July 2015
Short description: | p@chr20:43726947..43726954, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:43726947..43726954, - |
Coexpression cluster: | C373_epidermoid_Prostate_cord_squamous_testicular_pharyngeal_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.52e-50 | 2 |
cardiac muscle cell | 4.27e-34 | 3 |
cardiac muscle myoblast | 4.27e-34 | 3 |
striated muscle cell | 5.56e-26 | 4 |
cardiocyte | 1.45e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.52e-50 | 2 |
cervix epithelium | 4.52e-50 | 2 |
uterine cervix | 9.07e-18 | 6 |
neck of organ | 9.07e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.15e-21 | 5 |
squamous cell carcinoma | 2.00e-08 | 14 |