FFCP PHASE1:Hg19::chr20:43836095..43836111,-: Difference between revisions
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|id=chr20:43836095..43836111,-
|short_description=p@chr20:43836095..43836111,-
|description=CAGE_peak_at_chr20:43836095..43836111,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:43836095..43836111,- | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_at_chr20:43836095..43836111,- | |||
|id=chr20:43836095..43836111,- | |||
|ontology_enrichment_celltype=CL:0000342!2.37e-29!1;CL:0002565!2.37e-29!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.39e-66;1!UBERON:0007297;5.04e-34;2!UBERON:0003918;6.13e-08;10!UBERON:0007687;6.13e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!6.91e-39!3;UBERON:0004054!6.91e-39!3;UBERON:0001000!7.48e-30!1;UBERON:0005352!7.48e-30!1;UBERON:0000998!9.99e-30!1;UBERON:0006868!9.99e-30!1;UBERON:0005418!1.78e-29!1;UBERON:0001389!1.78e-29!1;UBERON:0000026!1.78e-29!1;UBERON:0008784!1.78e-29!1;UBERON:0006058!1.78e-29!1;UBERON:0003663!1.78e-29!1;UBERON:0001383!1.78e-29!1;UBERON:0004256!1.78e-29!1;UBERON:0002529!1.78e-29!1;UBERON:0004708!1.78e-29!1;UBERON:0002101!1.78e-29!1;UBERON:0004709!1.78e-29!1;UBERON:0003661!1.78e-29!1;UBERON:0002471!1.78e-29!1;UBERON:0004357!1.78e-29!1;UBERON:0009872!1.78e-29!1;UBERON:0004347!1.78e-29!1;UBERON:0005420!1.78e-29!1;UBERON:0005732!1.78e-29!1;UBERON:0006057!1.78e-29!1;UBERON:0000978!1.78e-29!1;UBERON:0002103!1.78e-29!1;UBERON:0001665!1.78e-29!1;UBERON:0003823!1.78e-29!1;UBERON:0000154!1.78e-29!1;UBERON:0005733!1.78e-29!1;UBERON:0005730!1.78e-29!1;UBERON:0005904!1.78e-29!4;UBERON:0002506!2.37e-29!1;UBERON:0001769!2.37e-29!1;UBERON:0001255!1.54e-15!2;UBERON:0001556!1.54e-15!2;UBERON:0001630!1.78e-15!2;UBERON:0005090!1.78e-15!2;UBERON:0001954!2.74e-15!2;UBERON:0003022!2.74e-15!2;UBERON:0002421!2.74e-15!2;UBERON:0002600!2.74e-15!2;UBERON:0003101!2.35e-12!22;UBERON:0000079!2.35e-12!22;UBERON:0003135!2.07e-11!11;UBERON:0003937!1.94e-10!12;UBERON:0005399!1.94e-10!12;UBERON:0007023!4.25e-09!115;UBERON:0000162!4.56e-09!14;UBERON:0001353!4.56e-09!14;UBERON:0000163!4.56e-09!14;UBERON:0006866!4.56e-09!14;UBERON:0000164!4.56e-09!14;UBERON:0000931!4.56e-09!14;UBERON:0004122!1.59e-08!15;UBERON:0000488!2.26e-08!4;UBERON:0003064!1.33e-07!37;UBERON:0001046!6.38e-07!19;UBERON:0000349!6.77e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.24e-88;3!UBERON:0004054;6.24e-88;3!UBERON:0001000;1.23e-66;1!UBERON:0005352;1.23e-66;1!UBERON:0000998;2.39e-66;1!UBERON:0006868;2.39e-66;1!UBERON:0005904;2.40e-66;4!UBERON:0001255;7.05e-34;2!UBERON:0001556;7.05e-34;2!UBERON:0000058;2.08e-27;10!UBERON:0003135;4.86e-25;11!UBERON:0004175;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22!UBERON:0000473;1.35e-09;8!UBERON:0003937;7.92e-07;12!UBERON:0005399;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,6.24e-88,3;UBERON:0004054,6.24e-88,3;UBERON:0001000,1.23e-66,1;UBERON:0005352,1.23e-66,1;UBERON:0000998,2.39e-66,1;UBERON:0006868,2.39e-66,1;UBERON:0005904,2.40e-66,4;UBERON:0001255,7.05e-34,2;UBERON:0001556,7.05e-34,2;UBERON:0003135,4.86e-25,11;UBERON:0000058,4.91e-15,19;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0004175,1.03e-11,25;UBERON:0003064,1.54e-10,28;UBERON:0000489,1.25e-09,31;UBERON:0000473,1.35e-09,8;UBERON:0000080,1.12e-08,9;UBERON:0002120,1.12e-08,9;UBERON:0004875,1.12e-08,9;UBERON:0005721,1.12e-08,9;UBERON:0005754,1.12e-08,9;UBERON:0007297,1.12e-08,9;UBERON:0004876,2.47e-07,11;UBERON:0002323,7.74e-07,46;UBERON:0003937,7.92e-07,12;UBERON:0005399,7.92e-07,12;UBERON:0003887,7.92e-07,12 | |||
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|short_description=p@chr20:43836095..43836111,- | |||
}} | }} |
Latest revision as of 14:19, 28 July 2015
Short description: | p@chr20:43836095..43836111, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:43836095..43836111, - |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 6.24e-88 | 3 |
internal male genitalia | 6.24e-88 | 3 |
vas deferens | 1.23e-66 | 1 |
spermatic cord | 1.23e-66 | 1 |
seminal vesicle | 2.39e-66 | 1 |
seminal fluid secreting gland | 2.39e-66 | 1 |
duct of male reproductive system | 2.40e-66 | 4 |
urinary bladder | 7.05e-34 | 2 |
lower urinary tract | 7.05e-34 | 2 |
male reproductive organ | 4.86e-25 | 11 |
duct | 4.91e-15 | 19 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
internal genitalia | 1.03e-11 | 25 |
intermediate mesoderm | 1.54e-10 | 28 |
cavitated compound organ | 1.25e-09 | 31 |
testis | 1.35e-09 | 8 |
mesonephros | 1.12e-08 | 9 |
pronephros | 1.12e-08 | 9 |
nephrogenic cord | 1.12e-08 | 9 |
pronephric mesoderm | 1.12e-08 | 9 |
rostral part of nephrogenic cord | 1.12e-08 | 9 |
presumptive pronephric mesoderm | 1.12e-08 | 9 |
urogenital ridge | 2.47e-07 | 11 |
body cavity | 7.74e-07 | 46 |
sex gland | 7.92e-07 | 12 |
male reproductive gland | 7.92e-07 | 12 |
intraembryonic coelom | 7.92e-07 | 12 |