FFCP PHASE1:Hg19::chr20:43837256..43837271,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=54bp_to_CU691119_5end | |||
|cluster_id=chr20:43837256..43837271,- | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_1_at_CU691119_5end | |||
|id=chr20:43837256..43837271,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;7.05e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.47e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.39e-66;1!UBERON:0007297;5.04e-34;2!UBERON:0003918;6.13e-08;10!UBERON:0007687;6.13e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!1.28e-53!3;UBERON:0004054!1.28e-53!3;UBERON:0001000!6.62e-41!1;UBERON:0005352!6.62e-41!1;UBERON:0000998!9.91e-41!1;UBERON:0006868!9.91e-41!1;UBERON:0005904!1.48e-40!4;UBERON:0001255!6.96e-21!2;UBERON:0001556!6.96e-21!2;UBERON:0003101!4.85e-17!22;UBERON:0000079!4.85e-17!22;UBERON:0003135!1.62e-15!11;UBERON:0003937!3.14e-14!12;UBERON:0005399!3.14e-14!12;UBERON:0000162!2.82e-12!14;UBERON:0001353!2.82e-12!14;UBERON:0000163!2.82e-12!14;UBERON:0006866!2.82e-12!14;UBERON:0000164!2.82e-12!14;UBERON:0000931!2.82e-12!14;UBERON:0004122!1.58e-11!15;UBERON:0003064!2.01e-10!37;UBERON:0001046!2.56e-09!19;UBERON:0006554!6.87e-09!44;UBERON:0001008!1.04e-08!45;UBERON:0004175!2.14e-07!25;UBERON:0000058!3.78e-07!26;UBERON:0005156!7.53e-07!59;UBERON:0000990!7.53e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.24e-88;3!UBERON:0004054;6.24e-88;3!UBERON:0001000;1.23e-66;1!UBERON:0005352;1.23e-66;1!UBERON:0000998;2.39e-66;1!UBERON:0006868;2.39e-66;1!UBERON:0005904;2.40e-66;4!UBERON:0000058;2.08e-27;10!UBERON:0003135;4.86e-25;11!UBERON:0004175;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22!UBERON:0000473;1.35e-09;8!UBERON:0003937;7.92e-07;12!UBERON:0005399;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,6.24e-88,3;UBERON:0004054,6.24e-88,3;UBERON:0001000,1.23e-66,1;UBERON:0005352,1.23e-66,1;UBERON:0000998,2.39e-66,1;UBERON:0006868,2.39e-66,1;UBERON:0005904,2.40e-66,4;UBERON:0003135,4.86e-25,11;UBERON:0000058,4.91e-15,19;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0004175,1.03e-11,25;UBERON:0000473,1.35e-09,8;UBERON:0000080,1.12e-08,9;UBERON:0002120,1.12e-08,9;UBERON:0004875,1.12e-08,9;UBERON:0005721,1.12e-08,9;UBERON:0005754,1.12e-08,9;UBERON:0007297,1.12e-08,9;UBERON:0004876,2.47e-07,11;UBERON:0003937,7.92e-07,12;UBERON:0005399,7.92e-07,12;UBERON:0003887,7.92e-07,12 | |||
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|short_description=p1@CU691119 | |||
}} | }} |
Latest revision as of 14:20, 28 July 2015
Short description: | p1@CU691119 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU691119_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | 54bp_to_CU691119_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.47e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 6.24e-88 | 3 |
internal male genitalia | 6.24e-88 | 3 |
vas deferens | 1.23e-66 | 1 |
spermatic cord | 1.23e-66 | 1 |
seminal vesicle | 2.39e-66 | 1 |
seminal fluid secreting gland | 2.39e-66 | 1 |
duct of male reproductive system | 2.40e-66 | 4 |
male reproductive organ | 4.86e-25 | 11 |
duct | 4.91e-15 | 19 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
internal genitalia | 1.03e-11 | 25 |
testis | 1.35e-09 | 8 |
mesonephros | 1.12e-08 | 9 |
pronephros | 1.12e-08 | 9 |
nephrogenic cord | 1.12e-08 | 9 |
pronephric mesoderm | 1.12e-08 | 9 |
rostral part of nephrogenic cord | 1.12e-08 | 9 |
presumptive pronephric mesoderm | 1.12e-08 | 9 |
urogenital ridge | 2.47e-07 | 11 |
sex gland | 7.92e-07 | 12 |
male reproductive gland | 7.92e-07 | 12 |
intraembryonic coelom | 7.92e-07 | 12 |