FFCP PHASE1:Hg19::chr20:44523645..44523673,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:44523645..44523673,+ | |||
|coexpression_cluster_id=C1869 | |||
|description=CAGE_peak_at_chr20:44523645..44523673,+ | |description=CAGE_peak_at_chr20:44523645..44523673,+ | ||
|id=chr20:44523645..44523673,+ | |id=chr20:44523645..44523673,+ | ||
|ontology_enrichment_celltype=CL:0000048!3.73e-10!430;CL:0000144!4.38e-10!625;CL:0000055!9.67e-10!180;CL:0000723!2.91e-09!436;CL:0000034!4.34e-09!444;CL:0002371!4.60e-09!591;CL:0000548!8.49e-09!679;CL:0000004!8.49e-09!679;CL:0000255!8.49e-09!679;CL:0000012!1.97e-08!682;CL:0000222!6.23e-08!119;CL:0002320!3.01e-07!365;CL:0002194!3.41e-07!63;CL:0000576!3.41e-07!63;CL:0000040!3.41e-07!63;CL:0000559!3.41e-07!63 | |ontology_enrichment_celltype=CL:0000048!3.73e-10!430;CL:0000144!4.38e-10!625;CL:0000055!9.67e-10!180;CL:0000723!2.91e-09!436;CL:0000034!4.34e-09!444;CL:0002371!4.60e-09!591;CL:0000548!8.49e-09!679;CL:0000004!8.49e-09!679;CL:0000255!8.49e-09!679;CL:0000012!1.97e-08!682;CL:0000222!6.23e-08!119;CL:0002320!3.01e-07!365;CL:0002194!3.41e-07!63;CL:0000576!3.41e-07!63;CL:0000040!3.41e-07!63;CL:0000559!3.41e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.94e-08;39!CL:0000234;1.94e-08;39!CL:0000860;8.52e-07;33!CL:0002057;8.52e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.39e-11,427;CL:0000723,1.34e-10,433;CL:0000034,4.20e-10,441;CL:0002320,1.52e-09,361;CL:0000134,4.25e-08,354;CL:0000222,1.22e-07,121;CL:0000473,1.31e-07,48;CL:0000234,1.31e-07,48;CL:0000219,8.09e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.13e-11!448;UBERON:0004120!1.13e-11!448;UBERON:0006603!1.13e-11!448;UBERON:0002204!5.10e-08!167;UBERON:0003081!3.04e-07!216;UBERON:0002384!3.17e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.95e-13,315;UBERON:0004120,3.95e-13,315;UBERON:0006603,3.95e-13,315;UBERON:0002384,1.35e-09,371;UBERON:0002204,1.43e-08,167;UBERON:0003081,8.35e-08,203 | |||
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| ||
|short_description=p@chr20:44523645..44523673,+ | |short_description=p@chr20:44523645..44523673,+ | ||
}} | }} |
Latest revision as of 14:33, 28 July 2015
Short description: | p@chr20:44523645..44523673, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:44523645..44523673, + |
Coexpression cluster: | C1869_Monocytederived_leiomyoma_Osteoblast_Fibroblast_Prostate_mixed_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.39e-11 | 427 |
somatic stem cell | 1.34e-10 | 433 |
stem cell | 4.20e-10 | 441 |
connective tissue cell | 1.52e-09 | 361 |
mesenchymal cell | 4.25e-08 | 354 |
mesodermal cell | 1.22e-07 | 121 |
defensive cell | 1.31e-07 | 48 |
phagocyte | 1.31e-07 | 48 |
motile cell | 8.09e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 3.95e-13 | 315 |
mesoderm-derived structure | 3.95e-13 | 315 |
presumptive mesoderm | 3.95e-13 | 315 |
connective tissue | 1.35e-09 | 371 |
musculoskeletal system | 1.43e-08 | 167 |
lateral plate mesoderm | 8.35e-08 | 203 |